pat-s
c61d951875
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fix(repair-built-stamp): patch the published PACKAGES.rds once bincraft drops cranlike ( #236 ) ...
Follow-up to https://codefloe.com/rpkgs/bincraft/pulls/228 (bincraft#33), which drops the cranlike and desc forks.
## Why
After that change, `upload_package_index()` no longer keeps a `PACKAGES.db`.
It reuses the records of the slot's published `PACKAGES.rds`, as long as each tarball is still listed with the same ETag.
`local/repair-built-stamp.R` patched `PACKAGES.db`, so it would stop having any effect.
## Changes
- `local/repair-built-stamp.R` now patches `Built` in each slot's `PACKAGES.rds` and then re-emits the index.
- Only the slot's own rows are patched: the generic slot's rows without a `Path`, or a per-minor slot's rows whose `Path` is its minor.
- A missing stamp is not counted as broken, since bincraft clears it on purpose for source fallbacks.
- With a bincraft release that still loads cranlike, the script patches `PACKAGES.db` as before, so merge order does not matter.
- `bincraft::built_stamp()` was never exported, so the script failed at that line before this change; it now calls `bincraft:::built_stamp()`.
- The `GITHUB_PAT` comments in `reindex`, `weekly-rebuild-reindex` and `backfill-flat-safety` now give the current reason: bincraft reads DESCRIPTIONs from raw.githubusercontent.com.
- The README section on index files describes `upload_package_index()` instead of the forks.
## Testing
Tested against a moto S3 bucket, with bincraft installed from the bincraft#228 branch:
- A slot was indexed, then 3 of its 5 `Built` stamps were set to `R 4.5.0; NA; ...`.
- The dry run reported 5 entries, 3 broken.
- `--apply` rewrote the 3 stamps, and the re-emit logged `Index records: 5 reused, 0 read, 0 unreadable.`
- The published `PACKAGES` then had a valid stamp on all 5 records.
- With the released bincraft, which still loads cranlike, the script chose `PACKAGES.db`.
The stale `PACKAGES.db` objects in the slots can be deleted once a bincraft release with #228 is in use.
Reviewed-on: #236
2026-10-18 11:55:21 +00:00
fix(patches): cover every RcppParallel 6.x release with the bundled-TBB patch ( #228 )
2026-10-04 07:35:01 +00:00
fix(build): build packages requiring newer R on compatible minors ( #216 )
2026-09-13 09:35:50 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(abi): inspect flat objects of packages CRAN has removed ( #212 )
2026-09-09 18:35:33 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
add alpine321 to scripts
2024-12-29 10:18:55 +01:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
feat(slots): add a retirement workflow and a drift check ( #214 )
2026-09-11 13:14:17 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
fix(audit): replace arch subsection in place instead of appending duplicates ( #138 )
2026-07-21 08:51:23 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
feat(local): aggregate blocked-on-dependency reporting by dependency ( #131 )
2026-07-16 21:24:03 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(audit): replace arch subsection in place instead of appending duplicates ( #138 )
2026-07-21 08:51:23 +00:00
chore(local): add S3 migration and CRAN-source helper scripts
2026-06-14 13:02:48 +02:00
refactor: migrate package installation from pak to uvr ( #147 )
2026-07-31 12:19:26 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
chore(local): add S3 migration and CRAN-source helper scripts
2026-06-14 13:02:48 +02:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
feat: R-minor-sensitive binary builds (full + iterative) ( #84 )
2026-06-14 08:04:40 +00:00
fix(build): build packages requiring newer R on compatible minors ( #216 )
2026-09-13 09:35:50 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
feat(local): aggregate blocked-on-dependency reporting by dependency ( #131 )
2026-07-16 21:24:03 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
chore(local): add S3 migration and CRAN-source helper scripts
2026-06-14 13:02:48 +02:00
refactor: migrate package installation from pak to uvr ( #147 )
2026-07-31 12:19:26 +00:00
feat(rebuild): shard the weekly rebuild and make each shard resumable ( #163 )
2026-08-12 08:30:29 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
fix(repair-built-stamp): patch the published PACKAGES.rds once bincraft drops cranlike ( #236 )
2026-10-18 11:55:21 +00:00
feat(slots): add a retirement workflow and a drift check ( #214 )
2026-09-11 13:14:17 +00:00
refactor: migrate package installation from pak to uvr ( #147 )
2026-07-31 12:19:26 +00:00
fix(local): make trial-build-patch.R detect non-throwing build failures ( #134 )
2026-07-18 08:37:04 +00:00
fix(local): make the trial-build gate detect non-throwing build failures ( #130 )
2026-07-16 08:24:03 +00:00
chore(deps): update dependency nbafrank/uvr to v0.4.7
2026-10-11 00:32:41 +00:00
feat(local): auto-propose registry patches and track the feedback loop ( #117 )
2026-07-14 15:03:24 +00:00
fix(ci): do not print a missing timing as "NAs" ( #210 )
2026-09-09 15:01:29 +00:00
fix(ci): pass the metadata DB to per-minor reindexes and fail on errors ( #234 )
2026-10-17 07:46:09 +00:00
pat-s
c61d951875