devxy/build-cran-binaries
Watch
1
0
Fork
You've already forked build-cran-binaries
 0
Code Issues 10 Pull requests Releases Activity

feat(patches): auto-proposed registry patches (2026-07-15 17:47:03) #127

Closed
pat-s wants to merge 1 commit from auto/registry-patch-proposals into main
pull from: auto/registry-patch-proposals
merge into: devxy:main
Conversation 0 Commits 1 Files changed 2 +202 -3
2 changed files with 202 additions and 3 deletions
Download patch file Download diff file Expand all files Collapse all files

102
local/patches/proposals-log.json Normal file
View file

@ -0,0 +1,102 @@
[
{
"package": "BFpack",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": ["alpine-324", "ubuntu-2604"],
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "BayesERtools",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": ["alpine-323", "alpine-324", "ubuntu-2604"],
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "GMLTM",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": ["alpine-323", "alpine-324", "ubuntu-2604"],
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "PStrata",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "PVAClone",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "PoolTestR",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "PosteriorBootstrap",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "ProbBreed",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "R2D2ordinal",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": "ubuntu-2604",
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
},
{
"package": "RBesT",
"signature": "tbb-stddef-removed",
"tier": "makevars",
"confidence": "high",
"versions": "*",
"platforms": ["alpine-322", "alpine-323", "ubuntu-2604"],
"proposed_at": "2026-07-15 17:47:03",
"status": "proposed"
}
]

103
local/patches/registry.json
View file

@ -2,7 +2,10 @@
{
"package": "RcppParallel",
"versions": "*",
"platforms": ["alpine", "ubuntu-2604"],
"platforms": [
"alpine",
"ubuntu-2604"
],
"env": {},
"configure_args": [],
"makevars": {},
@ -12,7 +15,9 @@
{
"package": "fs",
"versions": "*",
"platforms": ["*"],
"platforms": [
"*"
],
"env": {},
"configure_args": [],
"makevars": {},
@ -22,7 +27,9 @@
{
"package": "rstan",
"versions": "*",
"platforms": ["*"],
"platforms": [
"*"
],
"env": {},
"configure_args": [],
"makevars": {
@ -30,5 +37,95 @@
},
"patch": null,
"reason": "StanHeaders' init_threadpool_tbb.hpp unconditionally includes the legacy <tbb/tbb_stddef.h> (removed in oneTBB 2021+) for version detection, breaking compilation of Module.cpp against the bundled oneTBB. Pre-defining TBB_INTERFACE_NEW skips that include and selects the modern tbb/global_control.h + tbb/task_arena.h path that the bundled TBB provides (-I/usr/local/include preserves the default CPPFLAGS the override replaces)"
},
{
"package": "BFpack",
"versions": "*",
"platforms": ["alpine-324", "ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "BayesERtools",
"versions": "*",
"platforms": ["alpine-323", "alpine-324", "ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "GMLTM",
"versions": "*",
"platforms": ["alpine-323", "alpine-324", "ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "PStrata",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "PVAClone",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "PoolTestR",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "PosteriorBootstrap",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "ProbBreed",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "R2D2ordinal",
"versions": "*",
"platforms": ["ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
},
{
"package": "RBesT",
"versions": "*",
"platforms": ["alpine-322", "alpine-323", "ubuntu-2604"],
"makevars": {
"CPPFLAGS": "-DTBB_INTERFACE_NEW"
},
"reason": "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
}
]