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This commit is contained in:
Patrick Schratz 2024-07-27 13:34:12 +02:00
commit dfa9dcf461
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 4 additions and 5 deletions
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.woodpecker/build.yaml
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@ -14,8 +14,7 @@ when:
# - PLATFORM: opensuse-155 # - PLATFORM: opensuse-155
# PLATFORM_ID: suse155 # PLATFORM_ID: suse155
steps: steps:
- name: Build - name: Build binaries
secrets: [red_hat_dev_pw, aws_access_key_id, aws_secret_access_key, pgpass, git_ro_token] secrets: [red_hat_dev_pw, aws_access_key_id, aws_secret_access_key, pgpass, git_ro_token]
image: docker.io/pats22/arm-binaries-r-ubi9 image: docker.io/pats22/arm-binaries-r-ubi9
pull: true pull: true
@ -33,13 +32,13 @@ steps:
# rscript_startup arg: required to pass down global option to future workers https://github.com/HenrikBengtsson/future/issues/134#issuecomment-2245666169 # rscript_startup arg: required to pass down global option to future workers https://github.com/HenrikBengtsson/future/issues/134#issuecomment-2245666169
- git clone https://pat-s:$$git_ro_token@git.devxy.io/devxy/arm64-r-binaries.git && cd arm64-r-binaries - git clone https://pat-s:$$git_ro_token@git.devxy.io/devxy/arm64-r-binaries.git && cd arm64-r-binaries
- rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries - rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries
- R -q -e 'pak::pak("dyfanjones/s3fs@file_upload")' - R -q -e 'pak::pak("dyfanjones/s3fs")'
- R -q -e 'install.packages(".", repos = NULL, quiet = FALSE); packageVersion("rBinaries")' - R -q -e 'install.packages(".", repos = NULL, quiet = FALSE); packageVersion("rBinaries")'
# manually install some packages into the cache so that some builds don't fail # manually install some packages into the cache so that some builds don't fail
# Hmisc -> ABCanalysis # Hmisc -> ABCanalysis
# - R -q -e 'pak::pak("Hmisc")' - R -q -e 'pak::pak(c("Hmisc", "pls", "abd", "doRNG"))'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/binaries - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/binaries
- R -q -e 'options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = "error"); pkgs = tools::CRAN_package_db()[[1]][10:15]; library(rBinaries); future::plan("multisession", workers = 4, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE))' - R -q -e 'options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = "error"); pkgs = tools::CRAN_package_db()[[1]][16:20]; library(rBinaries); future::plan("multisession", workers = 4, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE))'
backend_options: backend_options:
kubernetes: kubernetes:
resources: resources: