diff --git a/.woodpecker/build.yaml b/.woodpecker/build.yaml index a024ec1..9e694d9 100644 --- a/.woodpecker/build.yaml +++ b/.woodpecker/build.yaml @@ -14,8 +14,7 @@ when: # - PLATFORM: opensuse-155 # PLATFORM_ID: suse155 steps: - - name: Build - + - name: Build binaries secrets: [red_hat_dev_pw, aws_access_key_id, aws_secret_access_key, pgpass, git_ro_token] image: docker.io/pats22/arm-binaries-r-ubi9 pull: true @@ -33,13 +32,13 @@ steps: # rscript_startup arg: required to pass down global option to future workers https://github.com/HenrikBengtsson/future/issues/134#issuecomment-2245666169 - git clone https://pat-s:$$git_ro_token@git.devxy.io/devxy/arm64-r-binaries.git && cd arm64-r-binaries - rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries - - R -q -e 'pak::pak("dyfanjones/s3fs@file_upload")' + - R -q -e 'pak::pak("dyfanjones/s3fs")' - R -q -e 'install.packages(".", repos = NULL, quiet = FALSE); packageVersion("rBinaries")' # manually install some packages into the cache so that some builds don't fail # Hmisc -> ABCanalysis - # - R -q -e 'pak::pak("Hmisc")' + - R -q -e 'pak::pak(c("Hmisc", "pls", "abd", "doRNG"))' - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/binaries - - R -q -e 'options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = "error"); pkgs = tools::CRAN_package_db()[[1]][10:15]; library(rBinaries); future::plan("multisession", workers = 4, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE))' + - R -q -e 'options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = "error"); pkgs = tools::CRAN_package_db()[[1]][16:20]; library(rBinaries); future::plan("multisession", workers = 4, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE))' backend_options: kubernetes: resources: