allow to build only one tag in justfile
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2 changed files with 20 additions and 16 deletions
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@ -51,18 +51,18 @@ matrix:
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NCPUS: 2
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MEMORY: 29Gi
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STRATEGY: multisession
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- PLATFORM: ubuntu-2404
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BLOCK: 1:length(pkgs)
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ARCH: amd64
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NCPUS: 2
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MEMORY: 29Gi
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STRATEGY: multisession
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- PLATFORM: ubuntu-2204
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BLOCK: 1:length(pkgs)
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ARCH: amd64
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NCPUS: 2
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MEMORY: 29Gi
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STRATEGY: multisession
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# - PLATFORM: ubuntu-2404
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# BLOCK: 1:length(pkgs)
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# ARCH: amd64
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# NCPUS: 2
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# MEMORY: 29Gi
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# STRATEGY: multisession
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# - PLATFORM: ubuntu-2204
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# BLOCK: 1:length(pkgs)
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# ARCH: amd64
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# NCPUS: 2
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# MEMORY: 29Gi
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# STRATEGY: multisession
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- PLATFORM: alpine-320
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BLOCK: 1090:length(pkgs)
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ARCH: amd64
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@ -96,7 +96,7 @@ steps:
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# more complicated system dependencies which pak cannot resolve
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- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
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# set additional repos: important as otherwise some packages cannot be resolved (e.g. INLA). Also: setting our own binary repos so we can make use of them for dep installation at some point
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- R -q -e 'options(crayon.enabled = TRUE, Ncpus = ${NCPUS}, future.globals.onReference = NULL); pkgs = tools::CRAN_package_db()[[1]]; pkgs = setdiff(pkgs[${BLOCK}], c("RInno", "skedastic", "RPushbullet", "SimNPH", "SimDesign","simCAT", "SIAmodules", "shinytest2", "shinyIRT", "ShinyItemAnalysis", "shiny.benchmark", "scDIFtest", "RSP", "ROracle", "ROI.plugin.qpoases", "ROI.plugin.cplex", "RmecabKo", "rmarchingcubes", "RcppMeCab", "Rcplex", "ravetools", "Rbeast", "Rblpapi", "RcppEnsmallen", "qtkit", "priorCON", "prior3D", "PerFit", "outlierensembles", "nomnoml", "mxfda", "MultBiplotR", "mstDIF", "mdsr", "makepipe", "lordif", "KSgeneral", "kequate", "jstager", "jrt", "irtreliability", "irtQ", "irtpwr", "irtawsi", "GRShiny", "gpuR", "googletraffic", "giacR", "gamstransfer", "flps", "flow", "filters", "faoutlier", "equateIRT", "EnrichIntersect", "EFA.dimensions", "DFIT", "D3mirt", "ctgdist", "CoTiMA", "ConvertPar", "clrng", "bscui", "BifactorIndicesCalculator", "autoFC", "airt")); library(bincraftR); future::plan("${STRATEGY}", workers = ${NCPUS}, rscript_startup = quote(options(crayon.enabled = TRUE))); options(progressr.enable = TRUE); progressr::handlers('cli'); progressr::handlers(global = TRUE); pkgs = foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE, platform = "${PLATFORM}"))'
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- R -q -e 'options(crayon.enabled = TRUE, Ncpus = ${NCPUS}, future.globals.onReference = NULL); pkgs = tools::CRAN_package_db()[[1]]; pkgs = setdiff(pkgs[${BLOCK}], c("RInno", "skedastic", "RPushbullet", "SimNPH", "SimDesign","simCAT", "SIAmodules", "shinytest2", "shinyIRT", "ShinyItemAnalysis", "shiny.benchmark", "scDIFtest", "RSP", "ROracle", "ROI.plugin.qpoases", "ROI.plugin.cplex", "RmecabKo", "rmarchingcubes", "RcppMeCab", "Rcplex", "ravetools", "Rbeast", "Rblpapi", "RcppEnsmallen", "qtkit", "priorCON", "prior3D", "PerFit", "outlierensembles", "nomnoml", "mxfda", "MultBiplotR", "mstDIF", "mdsr", "makepipe", "lordif", "KSgeneral", "kequate", "jstager", "jrt", "irtreliability", "irtQ", "irtpwr", "irtawsi", "GRShiny", "gpuR", "googletraffic", "giacR", "gamstransfer", "flps", "flow", "filters", "faoutlier", "equateIRT", "EnrichIntersect", "EFA.dimensions", "DFIT", "D3mirt", "ctgdist", "CoTiMA", "ConvertPar", "clrng", "bscui", "BifactorIndicesCalculator", "autoFC", "airt")); library(bincraftR); future::plan("${STRATEGY}", workers = ${NCPUS}, rscript_startup = quote(options(crayon.enabled = TRUE))); options(progressr.enable = TRUE); progressr::handlers("cli"); progressr::handlers(global = TRUE); pkgs = foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE, platform = "${PLATFORM}"))'
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### Manual pkg builds
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# webshot2, tabledown, TestAnaAPP, trekcolors, Spectran, SimNPH, RPushbullet, SimDesign, simCAT, SIAmodules, shinytest2, ShinyItemAnalysis, shinyIRT, shiny.benchmark, scDIFtest, RSP, qtkit, PROsetta, prettifyAddins, PerFit, outlierensembles, nomnoml, mxfda, MultBiplotR, mstDIF, mdsr, makepipe, lordif, kequate, jstager, jrt, irtreliability, irtQ, irtpwr, irtGUI, irtawsi, GRShiny, GPCMlasso, googletraffic, giacR, flps, flow, faoutlier, equateIRT, EnrichIntersect, EFA.dimensions, DFIT, D3mirt, ctgdist, CoTiMA, ConvertPar, bscui, BifactorIndicesCalculator, autoFC, airt: wait for https://github.com/rstudio/r-system-requirements/pull/178
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# RInno: Windows-only
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10
Justfile
10
Justfile
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@ -5,6 +5,10 @@ image OS ARCH:
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docker buildx build --progress plain --build-arg GITHUB_PAT="$GITHUB_PAT" --build-arg ARCH={{ARCH}} -f docker/Dockerfile-{{OS}} --platform linux/{{ARCH}} -t devxygmbh/{{ARCH}}-binaries-r-{{OS}}:latest --push .; \
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fi
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# e.g. just build jammy arm64 later 1
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build OS ARCH PACKAGE NCPUS:
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docker run --rm -it --platform linux/{{ARCH}} -e AWS_ACCESS_KEY_ID="$AWS_ACCESS_KEY_ID" -e AWS_SECRET_ACCESS_KEY="$AWS_SECRET_ACCESS_KEY" -e PGPASS="$PGPASS" -e NCPUS={{NCPUS}} --pull=always devxygmbh/{{ARCH}}-binaries-r-{{OS}}:latest R -q -e "options(progressr.enable = TRUE); library(future); plan(multisession); progressr::handlers(global = TRUE); progressr::handlers('cli'); bincraftR::build_binary_package(\"{{PACKAGE}}\", build_for_minor=FALSE, debug=FALSE, force=TRUE, deps_verbose = TRUE)"
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# e.g. just build-all jammy arm64 later 1
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build-all OS ARCH PACKAGE NCPUS:
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docker run --rm -it --platform linux/{{ARCH}} -e AWS_ACCESS_KEY_ID="$AWS_ACCESS_KEY_ID" -e AWS_SECRET_ACCESS_KEY="$AWS_SECRET_ACCESS_KEY" -e PGPASS="$PGPASS" -e NCPUS={{NCPUS}} --pull=always devxygmbh/{{ARCH}}-binaries-r-{{OS}}:latest R -q -e "options(progressr.enable = TRUE); library(future); plan(multisession); progressr::handlers(global = TRUE); progressr::handlers('cli'); bincraftR::build_binary_package(\"{{PACKAGE}}\", build_for_minor=FALSE, debug=FALSE, force=TRUE, deps_verbose = TRUE)"
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# e.g. just build-single jammy arm64 later 1.3.2 1
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build-single OS ARCH PACKAGE TAG NCPUS:
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docker run --rm -it --platform linux/{{ARCH}} -e AWS_ACCESS_KEY_ID="$AWS_ACCESS_KEY_ID" -e AWS_SECRET_ACCESS_KEY="$AWS_SECRET_ACCESS_KEY" -e PGPASS="$PGPASS" -e NCPUS={{NCPUS}} --pull=always devxygmbh/{{ARCH}}-binaries-r-{{OS}}:latest R -q -e "options(progressr.enable = TRUE); library(future); plan(multisession); progressr::handlers(global = TRUE); progressr::handlers('cli'); bincraftR::build_binary_package(\"{{PACKAGE}}\", \"{{TAG}}\", build_for_minor=FALSE, debug=FALSE, force=TRUE, deps_verbose = TRUE)"
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