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create Makevars file with bash

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This commit is contained in:
Patrick Schratz 2024-07-30 21:33:08 +02:00
commit d6f6df70fd
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 1 additions and 1 deletions
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.woodpecker/build.yaml
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@ -39,7 +39,7 @@ steps:
- rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries
- R -q -e 'pak::pak("dyfanjones/s3fs")'
- R -q -e 'pak::local_install(); packageVersion("rBinaries")'
- mkdir -p /root/.R && echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" > /root/.R/Makevars
- mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" > /root/.R/Makevars'
# manually install some packages into the cache so that some builds don't fail
# Hmisc -> ABCanalysis
# - R -q -e 'Sys.setenv(PKG_SYSREQS = TRUE, PKG_SYSREQS_VERBOSE = TRUE, PKG_SYSREQS_PLATFORM = "redhat-9"); pak::pak(c("Hmisc", "pls", "abd", "doRNG", "devtools"))'