From d6f6df70fd81a7c0be633e96775d51986bbe69a4 Mon Sep 17 00:00:00 2001 From: pat-s Date: Tue, 30 Jul 2024 21:33:08 +0200 Subject: [PATCH] create Makevars file with bash --- .woodpecker/build.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.woodpecker/build.yaml b/.woodpecker/build.yaml index 5a33a0d..635499f 100644 --- a/.woodpecker/build.yaml +++ b/.woodpecker/build.yaml @@ -39,7 +39,7 @@ steps: - rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries - R -q -e 'pak::pak("dyfanjones/s3fs")' - R -q -e 'pak::local_install(); packageVersion("rBinaries")' - - mkdir -p /root/.R && echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" > /root/.R/Makevars + - mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" > /root/.R/Makevars' # manually install some packages into the cache so that some builds don't fail # Hmisc -> ABCanalysis # - R -q -e 'Sys.setenv(PKG_SYSREQS = TRUE, PKG_SYSREQS_VERBOSE = TRUE, PKG_SYSREQS_PLATFORM = "redhat-9"); pak::pak(c("Hmisc", "pls", "abd", "doRNG", "devtools"))'