build

.woodpecker/build-alpine-320-arm64.yaml

@@ -64,7 +64,7 @@ steps:
       - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
       - R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/devel/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch))'
       # Windows-only: 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd'
-      - xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); library(dplyr); library(bincraftR); pkgs = c('abmR', 'abn', 'abstr', 'abstractr', 'acdcR', 'ActCR', 'actel',  'activAnalyzer', 'actxps', 'acumos', 'adapt4pv', 'add2ggplot',  'adepro', 'adespatial', 'AdhereRViz', 'adw', 'africamonitor',  'ag5Tools', 'agriwater', 'aIc', 'AirExposure', 'ajv', 'alcyon',  'AlleleShift', 'almanac', 'alookr', 'altR2', 'amadeus', 'amt',  'angstroms', 'animalEKF', 'anipaths', 'AntMAN', 'APCalign', 'apcf',  'aPCoA', 'apisensr', 'Apollonius', 'appeears', 'AquaBEHER', 'arakno',  'arcgisgeocode', 'archive', 'arcpbf', 'areal', 'arealDB', 'aroma.affymetrix',  'aroma.cn', 'aroma.core', 'ARPALData', 'arrangements', 'artfima',  'asciicast', 'assignR', 'atakrig', 'atom4R', 'atpolR', 'audrex',  'audubon', 'autoBagging', 'autostats', 'av', 'AVGAS', 'aws',  'aws.wrfsmn', 'b64', 'badgen', 'baguette', 'bamm', 'BANAM', 'bangladesh',  'banter', 'bartCause', 'bartMan', 'base64', 'basemaps', 'basf',  'basifoR', 'bate', 'BAwiR', 'BayesfMRI', 'BayesOrdDesign', 'BayesVarSel',  'BayesXsrc', 'bbl', 'bcdata', 'bdc', 'bdl', 'BeeBDC', 'behaviorchange',  'bfboinet', 'bfsMaps', 'BIEN', 'bigDM', 'bigGP', 'bigrquerystorage',  'biocompute', 'biopixR', 'BioPred', 'bioregion', 'BiplotGUI',  'blackmarbler', 'blatr', 'blockCV', 'BoolFilter', 'boostingDEA',  'bpmnR', 'bRacatus', 'bratteli', 'BRBVS', 'brickster', 'brsim',  'BRugs', 'bs4Dash', 'BSPADATA', 'BSSoverSpace', 'BSTZINB', 'C50',  'CAinterprTools', 'Cairo', 'calendRio', 'calmate', 'camcorder',  'camtrapR', 'canadamaps', 'capm', 'carbonate', 'cartograflow',  'cartogram', 'cartogramR', 'cascsim', 'CaseBasedReasoning', 'cases',  'cati', 'catSurv', 'cauchypca', 'CausalGPS', 'causalHyperGraph',  'causalPAF', 'caviarpd', 'cbl', 'CCAMLRGIS', 'CCd', 'ccrs', 'cdlTools',  'cds', 'CDsampling', 'CDSE', 'CEEMDANML', 'cellKey', 'cellularautomata',  'censorcopula', 'CensSpatial', 'centerline', 'ceramic', 'CERFIT',  'Certara.RsNLME', 'cffdrs', 'cffr', 'cft', 'chatAI4R', 'ChernoffDist',  'chilemapas', 'chirps', 'chooseGCM', 'choosepc', 'CIMTx', 'cisp',  'cit', 'clarabel', 'cld3', 'cleangeo', 'cleanTS', 'clhs', 'ClickHouseHTTP',  'climateStability', 'CLimd', 'climetrics', 'clinDataReview',  'clrng', 'clusterMI', 'clustermole', 'clustTMB', 'ClusVis', 'CLVTools',  'cmprskcoxmsm', 'cmsaf', 'cmsafops', 'cnmap', 'CoastlineFD',  'CoClust', 'cohorttools', 'CoImp', 'colocr', 'colorfindr', 'colorist',  'colorizer', 'colormap', 'cols', 'comorosmaps', 'CompareMultipleModels',  'Compositional', 'CompositionalML', 'CompositionalRF', 'concaveman',  'ConcordanceTest', 'conmet', 'conos', 'consrq', 'constrainedKriging',  'ContaminatedMixt', 'conversim', 'cooltools', 'CoordinateCleaner',  'CopCTS', 'CopernicusDEM', 'CopulaCenR', 'copulaedas', 'coreCT',  'corrfuns', 'cosso', 'COST', 'countSTAR', 'covalchemy', 'coveR2',  'covid19india', 'CPC', 'cpmr', 'cppcheckR', 'cpss', 'CRE', 'creditmodel',  'crimeutils', 'CRMetrics', 'cropcircles', 'cropDemand', 'cropZoning',  'crsuggest', 'crumble', 'cruts', 'crwbmetareg', 'csa', 'cshapes',  'CSHShydRology', 'csmpv', 'CSTools', 'CTD', 'ctmcmove', 'ctmm',  'ctpm', 'ctrdata', 'CTRing', 'cubble', 'cubeview', 'cubing',  'CvmortalityMult', 'cylcop', 'cytometree', 'd4storagehub4R',  'DA', 'daff', 'dagitty', 'dagwood', 'daltoolboxdp', 'damAOI',  'dartR', 'dartR.base', 'dartR.captive', 'dartR.data', 'dartR.popgen',  'dartR.sexlinked', 'dartR.sim', 'dartR.spatial', 'datacleanr',  'dataone', 'datapack', 'datasetjson', 'dataspice', 'dbarts',  'DBHC', 'dblr', 'dbnlearn', 'dc3net', 'DCLEAR', 'DCluster', 'DClusterm',  'dcortools', 'dcorVS', 'dCovTS', 'ddml', 'DDPNA', 'deaR', 'decompDL',  'decomposedPSF', 'deducorrect', 'DeepLearningCausal', 'deepMOU',  'deforestable', 'delayed', 'dendroNetwork'); pkgs = setdiff(pkgs, c('RInno', 'MediaNews', 'doBy', 'DoE.base', 'DoE.wrapper', 'eha', 'FrF2', 'FrF2.catlg128', 'gRbase', 'gRain', 'IDPmisc', 'pbkrtest', 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd')); progressr::handlers('cli'); progressr::handlers(global = TRUE); foo = lapply(pkgs, function(x) bincraftR::build_binary_package(x, debug = FALSE, force = TRUE, platform = 'alpine-320'))"
+      - xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); library(dplyr); library(bincraftR); pkgs = c('AlleleShift', 'AntMAN', 'aPCoA', 'apisensr', 'autoslider.core',  'baguette', 'bartCause', 'bartMan', 'base64', 'BayesXsrc', 'bdl',  'bigGP', 'BiplotGUI', 'blackmarbler', 'blatr', 'BLCOP', 'blender',  'Blendstat', 'blindrecalc', 'blindreview', 'blink', 'bliss',  'blm', 'blme', 'blmeco', 'BLModel', 'blob', 'blockcluster', 'BlockCov',  'blockForest', 'blocklength', 'blockmatrix', 'BlockMissingData',  'blockmodeling', 'BlockmodelingGUI', 'blockmodels', 'blockrand',  'blocksdesign', 'blocs', 'blogdown', 'BLOQ', 'BLPestimatoR',  'BLR', 'blrm', 'BLRPM', 'BLRShiny', 'BLRShiny2', 'blsBandit',  'blscrapeR', 'BLSM', 'blsR', 'bltm', 'bluebike', 'BlythStillCasellaCI',  'BMA', 'bmabasket', 'BMAmevt', 'bmass', 'BMconcor', 'bmem', 'bmemLavaan',  'bmet', 'bmgarch', 'bmggum', 'BMisc', 'bmixture', 'bmlm', 'bmm',  'bmp', 'BMRBr', 'BMRMM', 'BMS', 'bmscstan', 'bmstdr', 'BMT',  'BMTAR', 'bnclassify', 'bndesr', 'bndovb', 'bnlearn', 'bnma',  'bnmonitor', 'bnnSurvival', 'bnpa', 'BNPdensity', 'BNPmix', 'bnpsd',  'BNPTSclust', 'BNrich', 'BNSL', 'BNSP', 'bnstruct', 'bnviewer',  'boa', 'BoardGames', 'bodenmiller', 'Bodi', 'bodsr', 'bodycomp',  'bodycompref', 'boggy', 'boilerpipeR', 'BOIN', 'boinet', 'boiwsa',  'BOJ', 'bolasso', 'bolsec', 'Bolstad2', 'BoltzMM', 'bondAnalyst',  'BondValuation', 'BoneProfileR', 'BonEV', 'bonn', 'bonsai', 'bonsaiforest',  'BRugs', 'bscui', 'C50', 'CaseBasedReasoning', 'causalHyperGraph',  'clrng', 'ConvertPar', 'CoTiMA', 'countSTAR', 'CRE', 'ctgdist',  'CTRing', 'D3mirt', 'dartR', 'dartR.base', 'dartR.captive', 'dartR.popgen',  'dartR.sexlinked', 'dartR.sim', 'dartR.spatial', 'DFIT', 'DGP4LCF',  'DoE.wrapper', 'doMPI', 'EBcoBART', 'ebmc', 'ecocomDP', 'eDITH',  'EFA.dimensions', 'EFAfactors', 'enerscape', 'epidm', 'epizootic',  'equateIRT', 'EthSEQ', 'excel.link', 'eyetools', 'fangs', 'faoutlier',  'filters', 'fingerPro', 'flow', 'fmf', 'FrF2.catlg128', 'GENLIB',  'ggESDA', 'giacR', 'glossa', 'gpuR', 'GTFSwizard', 'gwid', 'habtools',  'hdf5r', 'hdf5r.Extra', 'ieegio', 'imbalanceDatRel', 'intRinsic',  'intSDM', 'jrSiCKLSNMF', 'kazaam', 'KeyboardSimulator', 'lgpr',  'mapping', 'MazamaSpatialPlots', 'MDSGUI', 'medfateland', 'MediaNews',  'Mega2R', 'MetabolomicsBasics', 'midoc', 'minired', 'moc.gapbk',  'ModTools', 'movegroup', 'MPCR', 'nfl4th', 'nflverse', 'noisemodel',  'OpenCL', 'pastclim', 'pbdMPI', 'pbdSLAP', 'pcaL1', 'pgenlibr',  'pheble', 'phonics', 'plotBart', 'pmclust', 'PPRL', 'praatpicture',  'predhy.GUI', 'R2PPT', 'R2wd', 'ravetools', 'Rbeast', 'Rblpapi',  'rblt', 'RcmdrPlugin.cpd', 'RcmdrPlugin.GWRM', 'RcmdrPlugin.TeachStat',  'RcmdrPlugin.WorldFlora', 'Rcplex', 'RcppCWB', 'RcppMeCab', 'readNSx',  'redatamx', 'ReSurv', 'rFUSION', 'riAFTBART', 'RInno', 'rliger',  'rmarchingcubes', 'RmecabKo', 'Rmpi', 'ROI.plugin.cplex', 'ROI.plugin.qpoases',  'ROI.plugin.symphony', 'ROracle', 'Rpoppler', 'RPushbullet',  'RQuantLib', 'rsofun', 'RSP', 'Rsymphony', 'rWCVP', 'RWinEdt',  'SANple', 'sarsop', 'Scalelink', 'scDIFtest', 'secsse', 'sfadv',  'SGPdata', 'sgPLS', 'SGPR', 'sgpv', 'sgr', 'sgraph', 'sgsR',  'sgstar', 'sgt', 'shades', 'shadowr', 'shadowtext', 'shannon',  'ShapDoE', 'shape', 'ShapeChange', 'shapefiles', 'shapeNA', 'ShapePattern',  'shapeR', 'shapes', 'ShapeSelectForest', 'SHAPforxgboost', 'shapley',  'ShapleyOutlier', 'ShapleyValue', 'shapper', 'shapr', 'shapviz',  'shar', 'SharkDemography', 'sharp', 'sharpData', 'SharpeR', 'sharpeRratio',  'sharpPen', 'sharpr2', 'sharpshootR', 'sharx', 'shattering',  'shazam', 'SheetReader', 'SHELF', 'ShellChron', 'shelltrace',  'sherlock', 'SherlockHolmes', 'shidashi', 'shide', 'ShiftConvolvePoibin',  'shiftR'); pkgs = setdiff(pkgs, c('RInno', 'MediaNews', 'doBy', 'DoE.base', 'DoE.wrapper', 'eha', 'FrF2', 'FrF2.catlg128', 'gRbase', 'gRain', 'IDPmisc', 'pbkrtest', 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd', 'spdep')); progressr::handlers('cli'); progressr::handlers(global = TRUE); foo = lapply(pkgs, function(x) bincraftR::build_binary_package(x, debug = FALSE, force = TRUE, platform = 'alpine-320'))"
       ### Manual pkg builds
       # webshot2, tabledown, TestAnaAPP, trekcolors, Spectran, SimNPH, RPushbullet, SimDesign, simCAT, SIAmodules, shinytest2, ShinyItemAnalysis, shinyIRT, shiny.benchmark, scDIFtest, RSP, qtkit, PROsetta, prettifyAddins, PerFit, outlierensembles, nomnoml, mxfda, MultBiplotR, mstDIF, mdsr, makepipe, lordif, kequate, jstager, jrt, irtreliability, irtQ, irtpwr, irtGUI, irtawsi, GRShiny, GPCMlasso, googletraffic, giacR, flps, flow, faoutlier, equateIRT, EnrichIntersect, EFA.dimensions, DFIT, D3mirt, ctgdist, CoTiMA, ConvertPar, bscui, BifactorIndicesCalculator, autoFC, airt: wait for https://github.com/rstudio/r-system-requirements/pull/178
       # RInno, MediaNews: Windows-only