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update dockerfiles

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This commit is contained in:
Patrick Schratz 2024-08-04 09:46:09 +02:00
commit 4645c2e33c
Signed by: pat-s
GPG key ID: 3C6318841EF78925
4 changed files with 13 additions and 6 deletions
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3
docker/Dockerfile-redhat-8
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@ -5,8 +5,9 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH
ENV TZ="Europe/Berlin"
RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_DEV_PW" && subscription-manager repos --enable codeready-builder-for-rhel-8-aarch64-rpms
RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.noarch.rpm && dnf install -y epel-release
### install JAGS (needed for runjags which itself is again a dependency of many packages)
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop
RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN dnf install -y -q https://dl.fedoraproject.org/pub/epel/8/Everything/aarch64/Packages/h/hiredis-0.13.3-13.el8.aarch64.rpm && dnf install -y -q https://dl.fedoraproject.org/pub/epel/8/Everything/aarch64/Packages/c/ccache-3.7.7-1.el8.aarch64.rpm
RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/el8/R-4.4.1-1-1.aarch64.rpm

12
docker/Dockerfile-redhat-9
View file

@ -5,10 +5,16 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH
ENV TZ="Europe/Berlin"
RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_DEV_PW" && subscription-manager repos --enable codeready-builder-for-rhel-9-aarch64-rpms
### install JAGS (needed for runjags which itself is again a dependency of many packages)
RUN dnf install -y -q lapack-devel git gcc g++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel
RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.noarch.rpm && dnf install -y epel-release
RUN dnf install -y -q lapack-devel git gcc g++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel htop
RUN dnf install -y -q https://dl.fedoraproject.org/pub/epel/9/Everything/aarch64/Packages/h/hiredis-1.0.2-2.el9.aarch64.rpm && dnf install -y -q https://dl.fedoraproject.org/pub/epel/9/Everything/aarch64/Packages/c/ccache-4.5.1-2.el9.aarch64.rpm
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
### INSTALL R
RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/el9/R-4.4.1-1-1.aarch64.rpm
RUN dnf install -q -y R-4.4.1-1-1.aarch64.rpm
RUN R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/stable/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch))'

2
docker/Dockerfile-ubuntu-2204
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@ -4,7 +4,7 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH
ENV TZ="Europe/Berlin"
### install JAGS (needed for runjags which itself is again a dependency of many packages)
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop
RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/2204/r-4.4.1_1_arm64.deb

2
docker/Dockerfile-ubuntu-2404
View file

@ -4,7 +4,7 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH
ENV TZ="Europe/Berlin"
### install JAGS (needed for runjags which itself is again a dependency of many packages)
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop
RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/2404/r-4.4.1_1_arm64.deb