diff --git a/docker/Dockerfile-redhat-8 b/docker/Dockerfile-redhat-8 index 3bfdeff..2f74740 100644 --- a/docker/Dockerfile-redhat-8 +++ b/docker/Dockerfile-redhat-8 @@ -5,8 +5,9 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH ENV TZ="Europe/Berlin" RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_DEV_PW" && subscription-manager repos --enable codeready-builder-for-rhel-8-aarch64-rpms +RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.noarch.rpm && dnf install -y epel-release ### install JAGS (needed for runjags which itself is again a dependency of many packages) -RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel +RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd .. RUN dnf install -y -q https://dl.fedoraproject.org/pub/epel/8/Everything/aarch64/Packages/h/hiredis-0.13.3-13.el8.aarch64.rpm && dnf install -y -q https://dl.fedoraproject.org/pub/epel/8/Everything/aarch64/Packages/c/ccache-3.7.7-1.el8.aarch64.rpm RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/el8/R-4.4.1-1-1.aarch64.rpm diff --git a/docker/Dockerfile-redhat-9 b/docker/Dockerfile-redhat-9 index afa8bed..e80a955 100644 --- a/docker/Dockerfile-redhat-9 +++ b/docker/Dockerfile-redhat-9 @@ -5,10 +5,16 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH ENV TZ="Europe/Berlin" RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_DEV_PW" && subscription-manager repos --enable codeready-builder-for-rhel-9-aarch64-rpms -### install JAGS (needed for runjags which itself is again a dependency of many packages) -RUN dnf install -y -q lapack-devel git gcc g++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel -RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd .. +RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.noarch.rpm && dnf install -y epel-release +RUN dnf install -y -q lapack-devel git gcc g++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel htop RUN dnf install -y -q https://dl.fedoraproject.org/pub/epel/9/Everything/aarch64/Packages/h/hiredis-1.0.2-2.el9.aarch64.rpm && dnf install -y -q https://dl.fedoraproject.org/pub/epel/9/Everything/aarch64/Packages/c/ccache-4.5.1-2.el9.aarch64.rpm + +### CUSTOM DEPENDENCIES +# These usually are not packaged in OS repositories and need to be installed from source +# - JAGS (needed for runjags which itself is again a dependency of many packages) +RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd .. + +### INSTALL R RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/el9/R-4.4.1-1-1.aarch64.rpm RUN dnf install -q -y R-4.4.1-1-1.aarch64.rpm RUN R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/stable/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch))' diff --git a/docker/Dockerfile-ubuntu-2204 b/docker/Dockerfile-ubuntu-2204 index 4fe55b3..e2b841f 100644 --- a/docker/Dockerfile-ubuntu-2204 +++ b/docker/Dockerfile-ubuntu-2204 @@ -4,7 +4,7 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH ENV TZ="Europe/Berlin" ### install JAGS (needed for runjags which itself is again a dependency of many packages) -RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache +RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd .. RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/2204/r-4.4.1_1_arm64.deb diff --git a/docker/Dockerfile-ubuntu-2404 b/docker/Dockerfile-ubuntu-2404 index 27124b6..89e8ccf 100644 --- a/docker/Dockerfile-ubuntu-2404 +++ b/docker/Dockerfile-ubuntu-2404 @@ -4,7 +4,7 @@ ENV PATH=/opt/R/4.4.1/bin:$PATH ENV TZ="Europe/Berlin" ### install JAGS (needed for runjags which itself is again a dependency of many packages) -RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache +RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop RUN curl -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure && make && make install && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd .. RUN curl -O https://f003.backblazeb2.com/file/devxy-r-builds/2404/r-4.4.1_1_arm64.deb