Merge pull request #217 from rstudio/fedora40

Add Fedora 40

Makefile

@@ -1,4 +1,4 @@
-PLATFORMS := ubuntu-2004 ubuntu-2204 ubuntu-2404 debian-10 debian-11 debian-12 centos-7 centos-8 rhel-9 opensuse-155 fedora-38 fedora-39
+PLATFORMS := ubuntu-2004 ubuntu-2204 ubuntu-2404 debian-10 debian-11 debian-12 centos-7 centos-8 rhel-9 opensuse-155 fedora-38 fedora-39 fedora-40
 SLS_BINARY ?= ./node_modules/serverless/bin/serverless.js
 
 deps:

builder/Dockerfile.fedora-40

@@ -0,0 +1,88 @@
+FROM fedora:40
+
+ENV OS_IDENTIFIER fedora-40
+
+RUN dnf -y upgrade \
+    && dnf -y install dnf-plugins-core \
+    && dnf -y install \
+    autoconf \
+    automake \
+    bzip2-devel \
+    cairo-devel \
+    flexiblas-devel \
+    gcc-c++ \
+    gcc-gfortran \
+    java-11-openjdk-devel \
+    libICE-devel \
+    libSM-devel \
+    libX11-devel \
+    libXmu-devel \
+    libXt-devel \
+    libcurl-devel \
+    libicu-devel \
+    libjpeg-devel \
+    libpng-devel \
+    libtiff-devel \
+    libtool \
+    make \
+    ncurses-devel \
+    pango-devel \
+    pcre-devel \
+    pcre2-devel \
+    readline-devel \
+    rpm-build \
+    tcl-devel \
+    tex \
+    texinfo-tex \
+    texlive-collection-latexrecommended \
+    tk-devel \
+    unzip \
+    valgrind-devel \
+    which \
+    wget \
+    xz-devel \
+    zlib-devel \
+    && dnf clean all
+
+# Install AWS CLI
+RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-$(uname -m).zip" -o "awscliv2.zip" && \
+    unzip awscliv2.zip && \
+    ./aws/install && \
+    rm -rf aws awscliv2.zip
+
+RUN if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
+
+RUN curl -LO "https://github.com/goreleaser/nfpm/releases/download/v2.18.1/nfpm_$(cat /tmp/arch).rpm" && \
+    dnf install -y "nfpm_$(cat /tmp/arch).rpm" && \
+    rm "nfpm_$(cat /tmp/arch).rpm"
+
+RUN chmod 0777 /opt
+
+# Configure flags for that don't use the defaults in build.sh
+ENV CONFIGURE_OPTIONS="\
+    --enable-R-shlib \
+    --with-tcltk \
+    --enable-memory-profiling \
+    --with-x \
+    --with-system-valgrind-headers \
+    --with-tcl-config=/usr/lib64/tclConfig.sh \
+    --with-tk-config=/usr/lib64/tkConfig.sh \
+    --enable-prebuilt-html \
+    --with-blas=flexiblas \
+    --with-lapack=flexiblas"
+
+# Make sure that patching Java does not break R.
+# R's default JAVA_HOME path includes the exact Java version on CentOS/RHEL, which
+# requires users to run `R CMD javareconf` even on minor/patch upgrades. Use the
+# major version symlink to avoid this.
+# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Java-support
+# https://solutions.posit.co/envs-pkgs/using-rjava/
+ENV JAVA_HOME=/usr/lib/jvm/jre-11-openjdk
+
+# R 3.x requires PCRE2 for Pango support on RHEL 9
+ENV INCLUDE_PCRE2_IN_R_3 yes
+
+COPY package.fedora-40 /package.sh
+COPY build.sh .
+COPY patches /patches
+ENTRYPOINT ./build.sh

builder/docker-compose.yml

@@ -143,3 +143,15 @@ services:
     image: r-builds:fedora-39
     volumes:
       - ./integration/tmp:/tmp/output
+  fedora-40:
+    command: ./build.sh
+    environment:
+      - R_VERSION=${R_VERSION}
+      - R_INSTALL_PATH=${R_INSTALL_PATH}
+      - LOCAL_STORE=/tmp/output
+    build:
+      context: .
+      dockerfile: Dockerfile.fedora-40
+    image: r-builds:fedora-40
+    volumes:
+      - ./integration/tmp:/tmp/output

builder/package.fedora-40

@@ -0,0 +1,75 @@
+#!/bin/bash
+
+if [[ ! -d /tmp/output/${OS_IDENTIFIER} ]]; then
+  mkdir -p "/tmp/output/${OS_IDENTIFIER}"
+fi
+
+# R 3.x requires PCRE1. On RHEL 9, R 3.x also requires PCRE2 for Pango support.
+pcre_libs='- pcre2-devel'
+if [[ "${R_VERSION}" =~ ^3 ]]; then
+  pcre_libs='- pcre2-devel
+- pcre-devel'
+fi
+
+blas_lib='flexiblas-devel'
+
+# Create postremove script to remove empty directories, as nFPM doesn't include them in the RPM files.
+cat <<EOF >> /after-remove.sh
+if [ -d ${R_INSTALL_PATH} ]; then
+  rm -r ${R_INSTALL_PATH}
+fi
+EOF
+
+scripts="scripts:
+  postremove: /after-remove.sh
+"
+
+if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
+
+cat <<EOF > /tmp/nfpm.yml
+name: R-${R_VERSION}
+version: 1
+version_schema: none
+arch: $(cat /tmp/arch)
+release: 1
+maintainer: Posit Software, PBC <https://github.com/rstudio/r-builds>
+description: |
+  GNU R statistical computation and graphics system
+vendor: Posit Software, PBC
+homepage: https://www.r-project.org
+license: GPLv2+
+depends:
+- bzip2-devel
+- gcc
+- gcc-c++
+- gcc-gfortran
+- libcurl-devel
+- libicu-devel
+- libSM
+- libtiff
+- libXmu
+- libXt
+- make
+- ${blas_lib}
+- pango
+${pcre_libs}
+- tcl
+- tk
+- unzip
+- util-linux-core
+- which
+- xz-devel
+- zip
+- zlib-devel
+contents:
+- src: ${R_INSTALL_PATH}
+  dst: ${R_INSTALL_PATH}
+${scripts}
+EOF
+
+nfpm package \
+  -f /tmp/nfpm.yml \
+  -p rpm \
+  -t "/tmp/output/${OS_IDENTIFIER}"
+
+export PKG_FILE=$(ls /tmp/output/${OS_IDENTIFIER}/R-${R_VERSION}*.rpm | head -1)

serverless-resources.yml

@@ -299,6 +299,20 @@ rBuildsBatchJobDefinitionFedora39:
       Image: !Sub "${AWS::AccountId}.dkr.ecr.${AWS::Region}.amazonaws.com/r-builds:fedora-39"
     Timeout:
       AttemptDurationSeconds: 7200
+rBuildsBatchJobDefinitionFedora40:
+  Type: AWS::Batch::JobDefinition
+  Properties:
+    Type: container
+    ContainerProperties:
+      Command:
+        - ./build.sh
+      Vcpus: 4
+      Memory: 4096
+      JobRoleArn:
+        "Fn::GetAtt": [ rBuildsEcsTaskIamRole, Arn ]
+      Image: "#{AWS::AccountId}.dkr.ecr.#{AWS::Region}.amazonaws.com/r-builds:fedora-40"
+    Timeout:
+      AttemptDurationSeconds: 7200
 
 # step function cloudwatch event trigger resources
 rBuildsEventRuleIamRole:

serverless.yml

@@ -79,7 +79,9 @@ provider:
       Ref: rBuildsBatchJobDefinitionFedora38
     JOB_DEFINITION_ARN_fedora_39:
       Ref: rBuildsBatchJobDefinitionFedora39
-    SUPPORTED_PLATFORMS: ubuntu-2004,ubuntu-2204,ubuntu-2404,debian-10,debian-11,debian-12,centos-7,centos-8,rhel-9,opensuse-155,fedora-38,fedora-39
+    JOB_DEFINITION_ARN_fedora_40:
+      Ref: rBuildsBatchJobDefinitionFedora40
+    SUPPORTED_PLATFORMS: ubuntu-2004,ubuntu-2204,ubuntu-2404,debian-10,debian-11,debian-12,centos-7,centos-8,rhel-9,opensuse-155,fedora-38,fedora-39,fedora-40
 
 functions:
   queueBuilds:

test/docker-compose.yml

@@ -95,3 +95,11 @@ services:
       - R_VERSION=${R_VERSION}
     volumes:
       - ../:/r-builds
+  fedora-40:
+    image: fedora:40
+    command: /r-builds/test/test-yum.sh
+    environment:
+      - OS_IDENTIFIER=fedora-40
+      - R_VERSION=${R_VERSION}
+    volumes:
+      - ../:/r-builds