chore: patch rhel10 build files
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This commit is contained in:
Patrick Schratz 2025-06-30 16:35:46 +02:00
commit f869bd86ed
Signed by: pat-s
GPG key ID: 3C6318841EF78925
2 changed files with 24 additions and 67 deletions

View file

@ -1,4 +1,4 @@
FROM almalinux:10
FROM rockylinux/rockylinux:10
ENV OS_IDENTIFIER rhel-10
@ -59,7 +59,9 @@ RUN curl -LO "https://github.com/goreleaser/nfpm/releases/download/v2.18.1/nfpm_
RUN chmod 0777 /opt
# Configure flags for RHEL 9 that don't use the defaults in build.sh
# Configure flags for RHEL 10 that don't use the defaults in build.sh
# Since RHEL 9 with the R 4.3.0 release, RHEL/Fedora now uses FlexiBLAS as the
# default BLAS/LAPACK, which provides a native BLAS switching mechanism and matches EPEL.
ENV CONFIGURE_OPTIONS="\
--enable-R-shlib \
--with-tcltk \
@ -68,26 +70,25 @@ ENV CONFIGURE_OPTIONS="\
--with-system-valgrind-headers \
--with-tcl-config=/usr/lib64/tclConfig.sh \
--with-tk-config=/usr/lib64/tkConfig.sh \
--enable-prebuilt-html"
--enable-prebuilt-html \
--with-blas=flexiblas \
--with-lapack=flexiblas"
# RHEL 9 doesn't have the inconsolata font, so override the defaults.
# RHEL 10 doesn't have the inconsolata font, so override the defaults.
# This may be removed if RHEL ever adds the texlive-inconsolata package from Fedora.
# Or check `dnf provides '*/inconsolata.sty'` for a package that provides it.
# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Making-the-manuals
ENV R_RD4PDF="times,hyper"
# Make sure that patching Java does not break R.
# R's default JAVA_HOME path includes the exact Java version on CentOS/RHEL, which
# R's default JAVA_HOME path includes the exact Java version on RHEL, which
# requires users to run `R CMD javareconf` even on minor/patch upgrades. Use the
# major version symlink to avoid this.
# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Java-support
# https://solutions.posit.co/envs-pkgs/using-rjava/
ENV JAVA_HOME=/usr/lib/jvm/jre-11-openjdk
ENV JAVA_HOME=/usr/lib/jvm/jre-21-openjdk
# R 3.x requires PCRE2 for Pango support on RHEL 9
ENV INCLUDE_PCRE2_IN_R_3 yes
COPY package.rhel-9 /package.sh
COPY package.rhel-10 /package.sh
COPY build.sh .
COPY patches /patches
ENTRYPOINT ./build.sh

View file

@ -4,67 +4,22 @@ if [[ ! -d /tmp/output/${OS_IDENTIFIER} ]]; then
mkdir -p "/tmp/output/${OS_IDENTIFIER}"
fi
# R 3.x requires PCRE1. On RHEL 9, R 3.x also requires PCRE2 for Pango support.
pcre_libs='- pcre2-devel'
if [[ "${R_VERSION}" =~ ^3 ]]; then
pcre_libs='- pcre2-devel
- pcre-devel'
# R 4.5.0 and later require libzstd (with headers to link against libR)
zstd_libs='# - libzstd-devel'
if grep -q '^LIBS *=.*[-]lzstd' ${R_INSTALL_PATH}/lib/R/etc/Makeconf; then
zstd_libs='- libzstd-devel'
fi
# On RHEL and SUSE, we link R against the internal shared BLAS to make the
# R binaries more portable and allow users to switch BLAS implementations without
# having to recompile R. We default to OpenBLAS, but users may prefer other implementations.
#
# Binary packages built against the shared BLAS are also more portable and may be used
# with the default R distributed by RHEL/SUSE, or other R installations using
# shared BLAS and configured with a different BLAS (such as Microsoft R Open with MKL).
# This is especially important for Posit Package Manager's binary packages.
#
# However, EPEL 9's R now links externally against FlexiBLAS, which provides a
# native BLAS switching mechanism for Fedora/RHEL. Starting with R 4.3.0, we also
# link to external FlexiBLAS for compatibility.
# https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
#
# On Ubuntu/Debian, we link R against the external BLAS instead (--with-blas/--with-lapack),
# as those distributions use the alternatives system to swap BLAS libraries at runtime.
# The default R distributions on Ubuntu/Debian use the external BLAS, so we do as well
# for portability.
#
# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Shared-BLAS
if [[ "$("${R_INSTALL_PATH}/bin/R" CMD config BLAS_LIBS)" == "-lflexiblas" ]]; then
blas_lib='flexiblas-devel'
# Create postremove script to remove empty directories, as nFPM doesn't include them in the RPM files.
cat <<EOF >> /after-remove.sh
if [ -d ${R_INSTALL_PATH} ]; then
rm -r ${R_INSTALL_PATH}
fi
EOF
scripts="scripts:
postremove: /after-remove.sh
"
else
blas_lib='openblas-devel'
# Create post-install script required for OpenBLAS.
cat <<EOF >> /post-install.sh
mv ${R_INSTALL_PATH}/lib/R/lib/libRblas.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so.keep
ln -s /usr/lib64/libopenblasp.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so
EOF
# Create after-remove script to remove internal BLAS, which won't be cleaned up automatically.
cat <<EOF >> /after-remove.sh
if [ -d ${R_INSTALL_PATH} ]; then
rm -r ${R_INSTALL_PATH}
fi
EOF
scripts="scripts:
postinstall: /post-install.sh
postremove: /after-remove.sh
"
# Create postremove script to remove empty directories, as nFPM doesn't include them in the RPM files.
cat <<EOF >> /after-remove.sh
if [ -d ${R_INSTALL_PATH} ]; then
rm -r ${R_INSTALL_PATH}
fi
EOF
scripts="scripts:
postremove: /after-remove.sh
"
if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
@ -91,10 +46,11 @@ depends:
- libtiff
- libXmu
- libXt
${zstd_libs}
- make
- ${blas_lib}
- flexiblas-devel
- pango
${pcre_libs}
- pcre2-devel
- tcl
- tk
- unzip