Attempt at adding builds for Fedora 37 and 38
This commit is contained in:
Colin Rundel
parent
03dbd456d4
commit
6c9247cfea
5 changed files with 498 additions and 2 deletions
86
builder/Dockerfile.fedora-37
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86
builder/Dockerfile.fedora-37
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@ -0,0 +1,86 @@
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FROM fedora:37
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ENV OS_IDENTIFIER fedora-37
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RUN dnf -y upgrade \
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&& dnf -y install dnf-plugins-core \
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&& dnf -y install \
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autoconf \
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automake \
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bzip2-devel \
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cairo-devel \
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flexiblas-devel \
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gcc-c++ \
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gcc-gfortran \
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java-11-openjdk-devel \
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libICE-devel \
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libSM-devel \
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libX11-devel \
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libXmu-devel \
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libXt-devel \
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libcurl-devel \
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libicu-devel \
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libjpeg-devel \
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libpng-devel \
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libtiff-devel \
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libtool \
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make \
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ncurses-devel \
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pango-devel \
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pcre-devel \
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pcre2-devel \
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readline-devel \
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rpm-build \
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tcl-devel \
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tex \
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texinfo-tex \
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texlive-collection-latexrecommended \
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tk-devel \
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unzip \
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valgrind-devel \
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which \
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wget \
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xz-devel \
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zlib-devel \
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&& dnf clean all
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# Install AWS CLI
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RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-$(uname -m).zip" -o "awscliv2.zip" && \
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unzip awscliv2.zip && \
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./aws/install && \
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rm -rf aws awscliv2.zip
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RUN if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
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RUN curl -LO "https://github.com/goreleaser/nfpm/releases/download/v2.18.1/nfpm_$(cat /tmp/arch).rpm" && \
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dnf install -y "nfpm_$(cat /tmp/arch).rpm" && \
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rm "nfpm_$(cat /tmp/arch).rpm"
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RUN chmod 0777 /opt
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# Configure flags for RHEL 9 that don't use the defaults in build.sh
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ENV CONFIGURE_OPTIONS="\
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--enable-R-shlib \
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--with-tcltk \
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--enable-memory-profiling \
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--with-x \
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--with-system-valgrind-headers \
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--with-tcl-config=/usr/lib64/tclConfig.sh \
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--with-tk-config=/usr/lib64/tkConfig.sh \
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--enable-prebuilt-html"
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# Make sure that patching Java does not break R.
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# R's default JAVA_HOME path includes the exact Java version on CentOS/RHEL, which
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# requires users to run `R CMD javareconf` even on minor/patch upgrades. Use the
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# major version symlink to avoid this.
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# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Java-support
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# https://solutions.posit.co/envs-pkgs/using-rjava/
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ENV JAVA_HOME=/usr/lib/jvm/jre-11-openjdk
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# R 3.x requires PCRE2 for Pango support on RHEL 9
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ENV INCLUDE_PCRE2_IN_R_3 yes
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COPY package.fedora-37 /package.sh
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COPY build.sh .
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COPY patches /patches
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ENTRYPOINT ./build.sh
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86
builder/Dockerfile.fedora-38
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86
builder/Dockerfile.fedora-38
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@ -0,0 +1,86 @@
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FROM fedora:38
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ENV OS_IDENTIFIER fedora-38
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RUN dnf -y upgrade \
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&& dnf -y install dnf-plugins-core \
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&& dnf -y install \
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autoconf \
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automake \
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bzip2-devel \
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cairo-devel \
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flexiblas-devel \
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gcc-c++ \
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gcc-gfortran \
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java-11-openjdk-devel \
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libICE-devel \
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libSM-devel \
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libX11-devel \
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libXmu-devel \
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libXt-devel \
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libcurl-devel \
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libicu-devel \
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libjpeg-devel \
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libpng-devel \
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libtiff-devel \
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libtool \
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make \
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ncurses-devel \
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pango-devel \
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pcre-devel \
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pcre2-devel \
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readline-devel \
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rpm-build \
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tcl-devel \
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tex \
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texinfo-tex \
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texlive-collection-latexrecommended \
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tk-devel \
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unzip \
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valgrind-devel \
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which \
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wget \
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xz-devel \
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zlib-devel \
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&& dnf clean all
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# Install AWS CLI
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RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-$(uname -m).zip" -o "awscliv2.zip" && \
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unzip awscliv2.zip && \
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./aws/install && \
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rm -rf aws awscliv2.zip
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RUN if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
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RUN curl -LO "https://github.com/goreleaser/nfpm/releases/download/v2.18.1/nfpm_$(cat /tmp/arch).rpm" && \
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dnf install -y "nfpm_$(cat /tmp/arch).rpm" && \
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rm "nfpm_$(cat /tmp/arch).rpm"
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RUN chmod 0777 /opt
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# Configure flags for RHEL 9 that don't use the defaults in build.sh
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ENV CONFIGURE_OPTIONS="\
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--enable-R-shlib \
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--with-tcltk \
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--enable-memory-profiling \
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--with-x \
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--with-system-valgrind-headers \
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--with-tcl-config=/usr/lib64/tclConfig.sh \
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--with-tk-config=/usr/lib64/tkConfig.sh \
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--enable-prebuilt-html"
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# Make sure that patching Java does not break R.
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# R's default JAVA_HOME path includes the exact Java version on CentOS/RHEL, which
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# requires users to run `R CMD javareconf` even on minor/patch upgrades. Use the
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# major version symlink to avoid this.
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# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Java-support
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# https://solutions.posit.co/envs-pkgs/using-rjava/
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ENV JAVA_HOME=/usr/lib/jvm/jre-11-openjdk
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# R 3.x requires PCRE2 for Pango support on RHEL 9
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ENV INCLUDE_PCRE2_IN_R_3 yes
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COPY package.fedora-38 /package.sh
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COPY build.sh .
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COPY patches /patches
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ENTRYPOINT ./build.sh
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@ -107,3 +107,27 @@ services:
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image: r-builds:opensuse-154
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volumes:
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- ./integration/tmp:/tmp/output
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fedora-37:
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command: ./build.sh
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environment:
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- R_VERSION=${R_VERSION}
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- R_INSTALL_PATH=${R_INSTALL_PATH}
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- LOCAL_STORE=/tmp/output
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build:
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context: .
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dockerfile: Dockerfile.fedora-37
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image: r-builds:fedora-37
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volumes:
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- ./integration/tmp:/tmp/output
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fedora-38:
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command: ./build.sh
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environment:
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- R_VERSION=${R_VERSION}
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- R_INSTALL_PATH=${R_INSTALL_PATH}
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- LOCAL_STORE=/tmp/output
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build:
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context: .
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dockerfile: Dockerfile.fedora-38
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image: r-builds:fedora-38
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volumes:
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- ./integration/tmp:/tmp/output
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116
builder/package.fedora-37
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116
builder/package.fedora-37
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@ -0,0 +1,116 @@
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#!/bin/bash
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if [[ ! -d /tmp/output/${OS_IDENTIFIER} ]]; then
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mkdir -p "/tmp/output/${OS_IDENTIFIER}"
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fi
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# R 3.x requires PCRE1. On RHEL 9, R 3.x also requires PCRE2 for Pango support.
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pcre_libs='- pcre2-devel'
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if [[ "${R_VERSION}" =~ ^3 ]]; then
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pcre_libs='- pcre2-devel
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- pcre-devel'
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fi
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# On RHEL and SUSE, we link R against the internal shared BLAS to make the
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# R binaries more portable and allow users to switch BLAS implementations without
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# having to recompile R. We default to OpenBLAS, but users may prefer other implementations.
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#
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# Binary packages built against the shared BLAS are also more portable and may be used
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# with the default R distributed by RHEL/SUSE, or other R installations using
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# shared BLAS and configured with a different BLAS (such as Microsoft R Open with MKL).
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# This is especially important for Posit Package Manager's binary packages.
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#
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# However, EPEL 9's R now links externally against FlexiBLAS, which provides a
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# native BLAS switching mechanism for Fedora/RHEL. Starting with R 4.3.0, we also
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# link to external FlexiBLAS for compatibility.
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# https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
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#
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# On Ubuntu/Debian, we link R against the external BLAS instead (--with-blas/--with-lapack),
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# as those distributions use the alternatives system to swap BLAS libraries at runtime.
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# The default R distributions on Ubuntu/Debian use the external BLAS, so we do as well
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# for portability.
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#
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# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Shared-BLAS
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if [[ "$("${R_INSTALL_PATH}/bin/R" CMD config BLAS_LIBS)" == "-lflexiblas" ]]; then
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blas_lib='flexiblas-devel'
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# Create postremove script to remove empty directories, as nFPM doesn't include them in the RPM files.
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cat <<EOF >> /after-remove.sh
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if [ -d ${R_INSTALL_PATH} ]; then
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rm -r ${R_INSTALL_PATH}
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fi
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EOF
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scripts="scripts:
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postremove: /after-remove.sh
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"
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else
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blas_lib='openblas-devel'
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# Create post-install script required for OpenBLAS.
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cat <<EOF >> /post-install.sh
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mv ${R_INSTALL_PATH}/lib/R/lib/libRblas.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so.keep
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ln -s /usr/lib64/libopenblasp.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so
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EOF
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# Create after-remove script to remove internal BLAS, which won't be cleaned up automatically.
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cat <<EOF >> /after-remove.sh
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if [ -d ${R_INSTALL_PATH} ]; then
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rm -r ${R_INSTALL_PATH}
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fi
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EOF
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scripts="scripts:
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postinstall: /post-install.sh
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postremove: /after-remove.sh
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"
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fi
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if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
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cat <<EOF > /tmp/nfpm.yml
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name: R-${R_VERSION}
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version: 1
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version_schema: none
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arch: $(cat /tmp/arch)
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release: 1
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maintainer: Posit Software, PBC <https://github.com/rstudio/r-builds>
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description: |
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GNU R statistical computation and graphics system
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vendor: Posit Software, PBC
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homepage: https://www.r-project.org
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license: GPLv2+
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depends:
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- bzip2-devel
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- gcc
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- gcc-c++
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- gcc-gfortran
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- libcurl-devel
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- libicu-devel
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- libSM
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- libtiff
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- libXmu
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- libXt
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- make
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- ${blas_lib}
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- pango
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${pcre_libs}
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- tcl
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- tk
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- unzip
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- which
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- xz-devel
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- zip
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- zlib-devel
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contents:
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- src: ${R_INSTALL_PATH}
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dst: ${R_INSTALL_PATH}
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${scripts}
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EOF
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nfpm package \
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-f /tmp/nfpm.yml \
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-p rpm \
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-t "/tmp/output/${OS_IDENTIFIER}"
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export PKG_FILE=$(ls /tmp/output/${OS_IDENTIFIER}/R-${R_VERSION}*.rpm | head -1)
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116
builder/package.fedora-38
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116
builder/package.fedora-38
Normal file
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@ -0,0 +1,116 @@
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#!/bin/bash
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if [[ ! -d /tmp/output/${OS_IDENTIFIER} ]]; then
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mkdir -p "/tmp/output/${OS_IDENTIFIER}"
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fi
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# R 3.x requires PCRE1. On RHEL 9, R 3.x also requires PCRE2 for Pango support.
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pcre_libs='- pcre2-devel'
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if [[ "${R_VERSION}" =~ ^3 ]]; then
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pcre_libs='- pcre2-devel
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- pcre-devel'
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fi
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# On RHEL and SUSE, we link R against the internal shared BLAS to make the
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# R binaries more portable and allow users to switch BLAS implementations without
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# having to recompile R. We default to OpenBLAS, but users may prefer other implementations.
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#
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# Binary packages built against the shared BLAS are also more portable and may be used
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# with the default R distributed by RHEL/SUSE, or other R installations using
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# shared BLAS and configured with a different BLAS (such as Microsoft R Open with MKL).
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# This is especially important for Posit Package Manager's binary packages.
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#
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# However, EPEL 9's R now links externally against FlexiBLAS, which provides a
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# native BLAS switching mechanism for Fedora/RHEL. Starting with R 4.3.0, we also
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# link to external FlexiBLAS for compatibility.
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# https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
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#
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# On Ubuntu/Debian, we link R against the external BLAS instead (--with-blas/--with-lapack),
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# as those distributions use the alternatives system to swap BLAS libraries at runtime.
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# The default R distributions on Ubuntu/Debian use the external BLAS, so we do as well
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# for portability.
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#
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# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Shared-BLAS
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if [[ "$("${R_INSTALL_PATH}/bin/R" CMD config BLAS_LIBS)" == "-lflexiblas" ]]; then
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blas_lib='flexiblas-devel'
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# Create postremove script to remove empty directories, as nFPM doesn't include them in the RPM files.
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cat <<EOF >> /after-remove.sh
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if [ -d ${R_INSTALL_PATH} ]; then
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rm -r ${R_INSTALL_PATH}
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fi
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EOF
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scripts="scripts:
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postremove: /after-remove.sh
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"
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else
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blas_lib='openblas-devel'
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# Create post-install script required for OpenBLAS.
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cat <<EOF >> /post-install.sh
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mv ${R_INSTALL_PATH}/lib/R/lib/libRblas.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so.keep
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ln -s /usr/lib64/libopenblasp.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so
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EOF
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# Create after-remove script to remove internal BLAS, which won't be cleaned up automatically.
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cat <<EOF >> /after-remove.sh
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if [ -d ${R_INSTALL_PATH} ]; then
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rm -r ${R_INSTALL_PATH}
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fi
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EOF
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scripts="scripts:
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postinstall: /post-install.sh
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postremove: /after-remove.sh
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"
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fi
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if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
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cat <<EOF > /tmp/nfpm.yml
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name: R-${R_VERSION}
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version: 1
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version_schema: none
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arch: $(cat /tmp/arch)
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release: 1
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maintainer: Posit Software, PBC <https://github.com/rstudio/r-builds>
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description: |
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GNU R statistical computation and graphics system
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vendor: Posit Software, PBC
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homepage: https://www.r-project.org
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license: GPLv2+
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depends:
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- bzip2-devel
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- gcc
|
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- gcc-c++
|
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- gcc-gfortran
|
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- libcurl-devel
|
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- libicu-devel
|
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- libSM
|
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- libtiff
|
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- libXmu
|
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- libXt
|
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- make
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- ${blas_lib}
|
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- pango
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${pcre_libs}
|
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- tcl
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- tk
|
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- unzip
|
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- which
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- xz-devel
|
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- zip
|
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- zlib-devel
|
||||
contents:
|
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- src: ${R_INSTALL_PATH}
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dst: ${R_INSTALL_PATH}
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${scripts}
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EOF
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nfpm package \
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-f /tmp/nfpm.yml \
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-p rpm \
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-t "/tmp/output/${OS_IDENTIFIER}"
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export PKG_FILE=$(ls /tmp/output/${OS_IDENTIFIER}/R-${R_VERSION}*.rpm | head -1)
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