Merge pull request #182 from rstudio/deth-sles15sp5

Add R builds for openSUSE 15.5 / SLES 15 SP5
2023-10-03 09:32:04 -07:00 · 2023-10-03 09:32:04 -07:00 · 5532edb31d
commit 5532edb31d
parent 3247926d80 59b26c876a
3 changed files with 261 additions and 5 deletions
--- a/builder/Dockerfile.opensuse-155
+++ b/builder/Dockerfile.opensuse-155
@ -0,0 +1,103 @@
+FROM opensuse/leap:15.5
+
+ENV OS_IDENTIFIER opensuse-155
+
+# Most of these packages, and also the configure options that follow were determined
+# by reviewing "R-base.spec" from the following OpenSUSE RPM:
+# https://download.opensuse.org/repositories/devel:/languages:/R:/released/openSUSE_Leap_42.3/src/R-base-3.5.3-103.1.src.rpm
+
+RUN zypper --non-interactive update
+RUN zypper --non-interactive --gpg-auto-import-keys -n install \
+    bzip2 \
+    cairo-devel \
+    curl \
+    fdupes \
+    gcc \
+    gcc-c++ \
+    gcc-fortran \
+    glib2-devel \
+    glibc-locale \
+    help2man \
+    # Like openSUSE/SLES 15.4, SUSE 15.5 ships with both ICU 65 (libicu-devel) and
+    # ICU 69 (icu.691-devel). Prefer ICU 69 because the devel packages can't coexist, and
+    # zypper resolves libicu-devel to icu.691-devel when installing RPMs.
+    icu.691-devel \
+    java-11-openjdk-devel \
+    libX11-devel \
+    libXScrnSaver-devel \
+    libXmu-devel \
+    libXt-devel \
+    libbz2-devel \
+    libcurl-devel \
+    libjpeg-devel \
+    libpng-devel \
+    libtiff-devel \
+    make \
+    pango-devel \
+    pcre-devel \
+    pcre2-devel \
+    perl \
+    perl-macros \
+    readline-devel \
+    rpm-build \
+    shadow \
+    tcl-devel \
+    texinfo \
+    texlive-ae \
+    texlive-bibtex \
+    texlive-cm-super \
+    texlive-dvips \
+    texlive-fancyvrb \
+    texlive-helvetic \
+    texlive-inconsolata \
+    texlive-latex \
+    texlive-makeindex \
+    texlive-metafont \
+    texlive-psnfss \
+    texlive-tex \
+    texlive-times \
+    tk-devel \
+    unzip \
+    wget \
+    xdg-utils \
+    xorg-x11-devel \
+    xz-devel \
+    zip \
+    zlib-devel \
+    && zypper clean
+
+# Install AWS CLI
+RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-$(uname -m).zip" -o "awscliv2.zip" && \
+    unzip awscliv2.zip && \
+    ./aws/install && \
+    rm -rf aws awscliv2.zip
+
+RUN if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
+
+RUN curl -LO "https://github.com/goreleaser/nfpm/releases/download/v2.18.1/nfpm_$(cat /tmp/arch).rpm" && \
+    zypper --non-interactive --no-gpg-checks install "nfpm_$(cat /tmp/arch).rpm" && \
+    rm "nfpm_$(cat /tmp/arch).rpm"
+
+RUN chmod 0777 /opt
+
+# Configure flags for SUSE that don't use the defaults in build.sh
+ENV CONFIGURE_OPTIONS="\
+    --enable-R-shlib \
+    --with-tcltk \
+    --with-x \
+    --enable-memory-profiling \
+    --with-tcl-config=/usr/lib64/tclConfig.sh \
+    --with-tk-config=/usr/lib64/tkConfig.sh"
+
+# Make sure that patching Java does not break R.
+# On SUSE, the default JAVA_HOME path always uses the major Java version only,
+# but the JDK path is chosen by default. We change this to the JRE path to
+# support users who only want to install the JRE (non-devel) package.
+# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Java-support
+# https://solutions.posit.co/envs-pkgs/using-rjava/
+ENV JAVA_HOME=/usr/lib64/jvm/jre-11-openjdk
+
+COPY package.opensuse-155 /package.sh
+COPY build.sh .
+COPY patches /patches
+ENTRYPOINT ./build.sh
--- a/builder/docker-compose.yml
+++ b/builder/docker-compose.yml
@ -95,6 +95,18 @@ services:
    image: r-builds:rhel-9
    volumes:
      - ./integration/tmp:/tmp/output
+  opensuse-155:
+    command: ./build.sh
+    environment:
+      - R_VERSION=${R_VERSION}
+      - R_INSTALL_PATH=${R_INSTALL_PATH}
+      - LOCAL_STORE=/tmp/output
+    build:
+      context: .
+      dockerfile: Dockerfile.opensuse-155
+    image: r-builds:opensuse-155
+    volumes:
+      - ./integration/tmp:/tmp/output
  opensuse-154:
    command: ./build.sh
    environment:
@ -130,4 +142,4 @@ services:
      dockerfile: Dockerfile.fedora-38
    image: r-builds:fedora-38
    volumes:
-      - ./integration/tmp:/tmp/output
+      - ./integration/tmp:/tmp/output
--- a/builder/package.opensuse-155
+++ b/builder/package.opensuse-155
@ -0,0 +1,100 @@
+#!/bin/bash
+
+if [[ ! -d /tmp/output/${OS_IDENTIFIER} ]]; then
+  mkdir -p "/tmp/output/${OS_IDENTIFIER}"
+fi
+
+# R 3.x requires PCRE1
+pcre_lib='pcre2-devel'
+if [[ "${R_VERSION}" =~ ^3 ]]; then
+  pcre_lib='pcre-devel'
+fi
+
+# Create post-install script required for OpenBLAS.
+#
+# On RHEL and SUSE, we link R against the internal shared BLAS to make the
+# R binaries more portable and allow users to switch BLAS implementations without
+# having to recompile R. We default to OpenBLAS, but users may prefer other implementations.
+# 
+# Binary packages built against the shared BLAS are also more portable and may be used
+# with the default R distributed by RHEL/SUSE, or other R installations using
+# shared BLAS and configured with a different BLAS (such as Microsoft R Open with MKL).
+# This is especially important for RSPM's binary packages.
+#
+# On Ubuntu/Debian, we link R against the external BLAS instead (--with-blas/--with-lapack),
+# as those distributions use the alternatives system to swap BLAS libraries at runtime.
+# The default R distributions on Ubuntu/Debian use the external BLAS, so we do as well
+# for portability.
+#
+# https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Shared-BLAS
+cat <<EOF >> /post-install.sh
+mv ${R_INSTALL_PATH}/lib/R/lib/libRblas.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so.keep
+ln -s /usr/lib64/libopenblas.so ${R_INSTALL_PATH}/lib/R/lib/libRblas.so
+EOF
+
+# Create after-remove script to remove internal BLAS, which won't be cleaned up automatically.
+cat <<EOF >> /after-remove.sh
+if [ -d ${R_INSTALL_PATH} ]; then
+  rm -r ${R_INSTALL_PATH}
+fi
+EOF
+
+if [ "$(arch)" == "aarch64" ]; then echo arm64; else echo amd64; fi > /tmp/arch
+
+cat <<EOF > /tmp/nfpm.yml
+name: R-${R_VERSION}
+version: 1
+version_schema: none
+arch: $(cat /tmp/arch)
+release: 1
+maintainer: Posit Software, PBC <https://github.com/rstudio/r-builds>
+description: |
+  GNU R statistical computation and graphics system
+vendor: Posit Software, PBC
+homepage: https://www.r-project.org
+license: GPLv2+
+depends:
+- fontconfig
+- gcc
+- gcc-c++
+- gcc-fortran
+- glibc-locale
+- gzip
+- icu.691-devel
+- libbz2-devel
+- libcairo2
+- libcurl-devel
+- libfreetype6
+- libgomp1
+- libjpeg62
+- libopenblas_pthreads-devel
+- libpango-1_0-0
+- libreadline7
+- libtiff5
+- make
+- ${pcre_lib}
+- tar
+- tcl
+- tk
+- unzip
+- which
+- xorg-x11
+- xorg-x11-fonts-100dpi
+- xorg-x11-fonts-75dpi
+- xz-devel
+- zip
+- zlib-devel
+contents:
+- src: ${R_INSTALL_PATH}
+  dst: ${R_INSTALL_PATH}
+scripts:
+  postinstall: /post-install.sh
+  postremove: /after-remove.sh
+EOF
+
+nfpm package \
+  -f /tmp/nfpm.yml \
+  -p rpm \
+  -t "/tmp/output/${OS_IDENTIFIER}"
+
+export PKG_FILE=$(ls /tmp/output/${OS_IDENTIFIER}/R-${R_VERSION}*.rpm | head -1)