build-cran-binaries/local/excluded-packages.json
pat-s d558e27c11
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feat: R-minor-sensitive binary builds (full + iterative) (#84)
## Summary

Builds R-minor-sensitive CRAN packages once per installed R minor version (into per-minor S3 slots `…/contrib/<x.y>/`) and everything else once into the generic slot, driven by bincraft 4.2.0's ABI classifier. Both the full and iterative pipelines are covered.

## What's in here

**Detection / precompute**

- `local/r-minor-helpers.R` — pure `classify_from_metadata()` (NeedsCompilation / risky `LinkingTo`) + `parse_build_args()`, with unit tests.
- `local/packages-to-build.R` — adds a per-package `r_minor_sensitive` flag: cheap CRAN-metadata rules first, source download + `bincraft::needs_per_minor_recompile()` only for the ambiguous compiled subset (fail-safe to sensitive). Classified once per package, applied to all versions.

**Full build**

- `local/build-all.R` — passes the per-row `is_r_minor_sensitive` flag; new `--sensitive-only` mode builds just the risky subset.
- `.crow/build-all-versions-{amd64,arm64}.yaml` — install-deps persists the sensitive subset; build step runs a sensitive-only pass under each non-primary `/opt/R/*` minor; new step uploads the generic index plus a per-minor index for each minor.

**Iterative build**

- All 14 `.crow/process-updates-*.yaml` — primary pass uses `r_minor_detection = 'classifier'`; a sensitive-only multi-R pass builds risky updates under each other minor; per-minor index upload added.

**Tooling / housekeeping**

- Pins bincraft `v4.1.1` → `v4.2.0` across all workflows; removes the superseded standalone `build-r-minor-sensitive-packages.yaml`.
- Adds prek/pre-commit hooks (prettier, markdownlint, editorconfig-checker, yamllint, air) and applies them repo-wide; excludes the verbatim GPL `LICENSE.md` and auxiliary shell scripts.
- Design + implementation docs under `docs/superpowers/`.

## Requires before merge

- A `v4.2.0` git tag must be pushed on the bincraft repo (codefloe.com/rpkgs/bincraft) — the workflow install steps pin `@v4.2.0`. The full-build install-deps clones `main`, so it is unaffected.

Reviewed-on: #84
2026-06-14 08:04:40 +00:00

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[
{ "package": "RInno", "reason": "windows-only" },
{ "package": "KeyboardSimulator", "reason": "windows-only" },
{ "package": "R2PPT", "reason": "windows-only" },
{ "package": "RWinEdt", "reason": "windows-only" },
{ "package": "blatr", "reason": "windows-only" },
{ "package": "excel.link", "reason": "windows-only" },
{ "package": "spectrino", "reason": "windows-only" },
{ "package": "taskscheduleR", "reason": "windows-only" },
{ "package": "MDSGUI", "reason": "windows-only" },
{ "package": "BiplotGUI", "reason": "windows-only" },
{ "package": "R2wd", "reason": "windows-only" },
{ "package": "rFUSION", "reason": "windows-only" },
{ "package": "MediaNews", "reason": "windows-only" },
{ "package": "doBy", "reason": "hang" },
{ "package": "IDPmisc", "reason": "hang" },
{ "package": "frailtypack", "reason": "hang" },
{ "package": "afex", "reason": "hang" },
{ "package": "FrF2", "reason": "hang" },
{ "package": "DoE.base", "reason": "hang" },
{ "package": "agricolae", "reason": "hang" },
{ "package": "doFuture", "reason": "hang" },
{ "package": "fscaret", "reason": "hang" },
{ "package": "PHYLOGR", "reason": "hang" },
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{ "package": "pls", "reason": "hang" },
{ "package": "relaimpo", "reason": "hang" },
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{ "package": "neonstore", "reason": "hang" },
{ "package": "MachineShop", "reason": "hang" },
{ "package": "mvst", "reason": "hang" },
{ "package": "MacBehaviour", "reason": "hang" },
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{ "package": "RGIFT", "reason": "hang" },
{ "package": "KnowBR", "reason": "hang" },
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{ "package": "spdep", "reason": "hang" },
{ "package": "Rfast", "reason": "hang" },
{ "package": "compareGroups", "reason": "hang" },
{ "package": "ff", "reason": "hang" },
{ "package": "GsymPoint", "reason": "hang" },
{ "package": "RcppDynProg", "reason": "hang" },
{ "package": "comtradr", "reason": "hang" },
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{ "package": "PearsonDS", "reason": "hang" },
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{ "package": "ffmanova", "reason": "hang" },
{ "package": "fiery", "reason": "hang" },
{ "package": "ffscrapr", "reason": "hang" },
{ "package": "cold", "reason": "hang" },
{ "package": "RcmdrPlugin.DoE", "reason": "hang" },
{ "package": "RcmdrPlugin.NMBU", "reason": "hang" },
{ "package": "RcmdrPlugin.RiskDemo", "reason": "hang" },
{ "package": "RcmdrPlugin.ROC", "reason": "hang" },
{ "package": "RcmdrPlugin.TeachStat", "reason": "hang" },
{ "package": "RcmdrPlugin.TeachingDemos", "reason": "hang" },
{ "package": "RcmdrPlugin.UCA", "reason": "hang" },
{ "package": "RcmdrPlugin.WorldFlora", "reason": "hang" },
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{ "package": "RcmdrPlugin.survival", "reason": "hang" },
{ "package": "RcmdrPlugin.temis", "reason": "hang" },
{ "package": "GWlasso", "reason": "hang" },
{ "package": "GWmodelVis", "reason": "hang" }
]