build-cran-binaries/.crow/weekly-rebuild-missing.yaml

# Consolidated weekly-rebuild-missing pipeline (all platforms, both arches).
# One matrix row per OS/arch replaces the former per-platform files.
# Routing is preserved 1:1:
#   - cron:   each existing `weekly-rebuild-missing-<os>-<arch>` cron fires only
#             its matching matrix row (via the per-row `cron:` name filter).
#   - manual: `weekly_rebuild_missing` dropdown, default "all" (matches the
#             previous bare manual trigger that ran every os/arch); pick a
#             single <os>-<arch> to run just one.
# Arch placement is handled by the agent label (artemis=amd64, gaia=arm64).
variables:
  weekly_rebuild_missing:
    description: "Manual run target: a specific <os>-<arch>, or 'all' for every os/arch."
    options:
      - all
      - alpine-322-amd64
      - alpine-322-arm64
      - alpine-323-amd64
      - alpine-323-arm64
      - redhat-8-amd64
      - redhat-8-arm64
      - redhat-9-amd64
      - redhat-9-arm64
      - redhat-10-amd64
      - redhat-10-arm64
      - ubuntu-2204-amd64
      - ubuntu-2204-arm64
      - ubuntu-2404-amd64
      - ubuntu-2404-arm64
    default: all

when:
  - event: cron
    cron: weekly-rebuild-missing-${OS}-${ARCH}
  - event: manual
    evaluate: 'weekly_rebuild_missing == "all" || weekly_rebuild_missing == "${OS}-${ARCH}"'

skip_clone: true

labels:
  agent: ${AGENT}

matrix:
  include:
    - OS: alpine-322
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.5.3
      IMG: alpine:3.24
    - OS: alpine-322
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.5.3
      IMG: alpine:3.24
    - OS: alpine-323
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.5.3
      IMG: alpine:3.24
    - OS: alpine-323
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.5.3
      IMG: alpine:3.24
    - OS: redhat-8
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.4.3
      IMG: redhat:8
    - OS: redhat-8
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.4.3
      IMG: redhat:8
    - OS: redhat-9
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.4.3
      IMG: redhat:9
    - OS: redhat-9
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.4.3
      IMG: redhat:9
    - OS: redhat-10
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.5.3
      IMG: redhat:10
    - OS: redhat-10
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.5.3
      IMG: redhat:10
    - OS: ubuntu-2204
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.4.3
      IMG: ubuntu:jammy
    - OS: ubuntu-2204
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.4.3
      IMG: ubuntu:jammy
    - OS: ubuntu-2404
      ARCH: amd64
      AGENT: artemis
      R_VERSION: 4.4.3
      IMG: ubuntu:noble
    - OS: ubuntu-2404
      ARCH: arm64
      AGENT: gaia
      R_VERSION: 4.4.3
      IMG: ubuntu:noble

steps:
  - name: 'Rebuild missing binaries'
    image: reg.devxy.io/rpkgs/build-env-${IMG}
    pull: true
    environment:
      RED_HAT_DEV_PW:
        from_secret: RED_HAT_DEV_PW
      B2_S3_ACCESS_KEY:
        from_secret: B2_S3_ACCESS_KEY
      B2_S3_SECRET_KEY:
        from_secret: B2_S3_SECRET_KEY
      PGPASS:
        from_secret: PGPASS
      REPO_RO_TOKEN:
        from_secret: REPO_RO_TOKEN
      GITHUB_PAT:
        from_secret: GITHUB_PAT
      FORGEJO_TOKEN:
        from_secret: FORGEJO_TOKEN
      GIT_USER: pat-s
      R_PKG_CACHE_DIR: /mnt/cache/pkgcache
      R_LIBS_USER: /mnt/cache/R-pkgs
      R_VERSION: ${R_VERSION}
      CCACHE_DIR: /mnt/cache/ccache
      PLATFORM: ${OS}
      ARCH: ${ARCH}
      NCPUS: 2
    commands:
      - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git .
      - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
      - rm -rf /mnt/cache/R-pkgs/00LOCK-*
      - /opt/R/$R_VERSION/bin/R -q -e 'if (!requireNamespace("bincraft", quietly = TRUE) || packageVersion("bincraft") != "4.2.2") pak::pak("git::https://codefloe.com/rpkgs/bincraft.git@v4.2.2")'
      - /opt/R/$R_VERSION/bin/R -q -e 'packageVersion("bincraft")'
      - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi
      - /opt/R/$R_VERSION/bin/R -q -e 'pak::pak("httr2")'
      - /opt/R/$R_VERSION/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")'
      - $XVFB $XVFB_ARGS -- /opt/R/$R_VERSION/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1
    backend_options:
      docker:
        resources:
          requests:
            memory: 5Gi
            cpu: 3000m
          limits:
            memory: 18Gi
            cpu: 3000m