pat-s
d558e27c11
## Summary
Builds R-minor-sensitive CRAN packages once per installed R minor version (into per-minor S3 slots `…/contrib/<x.y>/`) and everything else once into the generic slot, driven by bincraft 4.2.0's ABI classifier. Both the full and iterative pipelines are covered.
## What's in here
**Detection / precompute**
- `local/r-minor-helpers.R` — pure `classify_from_metadata()` (NeedsCompilation / risky `LinkingTo`) + `parse_build_args()`, with unit tests.
- `local/packages-to-build.R` — adds a per-package `r_minor_sensitive` flag: cheap CRAN-metadata rules first, source download + `bincraft::needs_per_minor_recompile()` only for the ambiguous compiled subset (fail-safe to sensitive). Classified once per package, applied to all versions.
**Full build**
- `local/build-all.R` — passes the per-row `is_r_minor_sensitive` flag; new `--sensitive-only` mode builds just the risky subset.
- `.crow/build-all-versions-{amd64,arm64}.yaml` — install-deps persists the sensitive subset; build step runs a sensitive-only pass under each non-primary `/opt/R/*` minor; new step uploads the generic index plus a per-minor index for each minor.
**Iterative build**
- All 14 `.crow/process-updates-*.yaml` — primary pass uses `r_minor_detection = 'classifier'`; a sensitive-only multi-R pass builds risky updates under each other minor; per-minor index upload added.
**Tooling / housekeeping**
- Pins bincraft `v4.1.1` → `v4.2.0` across all workflows; removes the superseded standalone `build-r-minor-sensitive-packages.yaml`.
- Adds prek/pre-commit hooks (prettier, markdownlint, editorconfig-checker, yamllint, air) and applies them repo-wide; excludes the verbatim GPL `LICENSE.md` and auxiliary shell scripts.
- Design + implementation docs under `docs/superpowers/`.
## Requires before merge
- A `v4.2.0` git tag must be pushed on the bincraft repo (codefloe.com/rpkgs/bincraft) — the workflow install steps pin `@v4.2.0`. The full-build install-deps clones `main`, so it is unaffected.
Reviewed-on: #84
81 lines
2.2 KiB
YAML
81 lines
2.2 KiB
YAML
### Required extra vars
|
|
# woodpecker-cli pipeline create --var task=archive-missed-packages --branch=main --log-level=info 7
|
|
when:
|
|
- event: manual
|
|
evaluate: 'task == "archive-missed-packages"'
|
|
- event: cron
|
|
cron: archive-missed-packages
|
|
|
|
matrix:
|
|
include:
|
|
- CODENAME: jammy
|
|
ARCH: amd64
|
|
- CODENAME: jammy
|
|
ARCH: arm64
|
|
- CODENAME: noble
|
|
ARCH: amd64
|
|
- CODENAME: noble
|
|
ARCH: arm64
|
|
- CODENAME: redhat-8
|
|
ARCH: amd64
|
|
- CODENAME: redhat-8
|
|
ARCH: arm64
|
|
- CODENAME: redhat-9
|
|
ARCH: amd64
|
|
- CODENAME: redhat-9
|
|
ARCH: arm64
|
|
- CODENAME: redhat-10
|
|
ARCH: amd64
|
|
- CODENAME: redhat-10
|
|
ARCH: arm64
|
|
- CODENAME: alpine321
|
|
ARCH: amd64
|
|
- CODENAME: alpine321
|
|
ARCH: arm64
|
|
- CODENAME: alpine322
|
|
ARCH: amd64
|
|
- CODENAME: alpine322
|
|
ARCH: arm64
|
|
- CODENAME: alpine323
|
|
ARCH: amd64
|
|
- CODENAME: alpine323
|
|
ARCH: arm64
|
|
|
|
steps:
|
|
- name: 'Archive missed packages'
|
|
image: reg.devxy.io/rpkgs/build-env-alpine:3.24
|
|
pull: true
|
|
environment:
|
|
RED_HAT_DEV_PW:
|
|
from_secret: RED_HAT_DEV_PW
|
|
B2_S3_ACCESS_KEY:
|
|
from_secret: B2_S3_ACCESS_KEY
|
|
B2_S3_SECRET_KEY:
|
|
from_secret: B2_S3_SECRET_KEY
|
|
PGPASS:
|
|
from_secret: PGPASS
|
|
REPO_RO_TOKEN:
|
|
from_secret: REPO_RO_TOKEN
|
|
GITHUB_PAT:
|
|
from_secret: GITHUB_PAT
|
|
# normal env vars
|
|
GIT_USER: pat-s
|
|
R_VERSION: 4.5.3
|
|
commands:
|
|
- /opt/R/$R_VERSION/bin/R -q -e 'if (!requireNamespace("bincraft", quietly = TRUE) || packageVersion("bincraft") != "4.2.0") pak::pak("git::https://codefloe.com/rpkgs/bincraft.git@v4.2.0", dependencies = TRUE)'
|
|
- /opt/R/$R_VERSION/bin/R -q -e 'packageVersion("bincraft")'
|
|
- /opt/R/$R_VERSION/bin/R -q -e 'bincraft::process_unarchived_pkgs(Sys.getenv("CODENAME"), Sys.getenv("ARCH"), workers = 2L)'
|
|
backend_options:
|
|
kubernetes:
|
|
resources:
|
|
requests:
|
|
memory: 1Gi
|
|
cpu: 2000m
|
|
limits:
|
|
memory: 1200Mi
|
|
cpu: 2000m
|
|
tolerations:
|
|
- key: 'CI'
|
|
operator: 'Equal'
|
|
value: 'true'
|
|
effect: 'NoSchedule'
|