build-cran-binaries/local/failing-builds-classify.R
pat-s 8afa584da3
feat(local): auto-propose registry patches and track the feedback loop
Implement steps 3 + 4 of issue #115 on top of the failure classifier, now
that bincraft v4.4.3 applies registry patches/makevars/configure_args to the
target build (not just dependencies), so a trial patched build is meaningful.

- refactor the classify helpers to expose a pure build_triage_report() and a
  list-returning entry builder; failing-builds-report.R now renders from it
- add local/propose-patches.R (step 3, "propose, do not apply"): emit a
  pre-filled registry.json entry for each classified, safe, unregistered
  failure, validate the candidate set against a temporary merged registry,
  and (only on request) --write it plus a proposals ledger, or --open-issue a
  Forgejo tracking issue; the human gate and validator/trial-build acceptance
  stay, and novel source diffs / unknown signatures are never proposed
- add local/trial-build-patch.R: isolated bincraft build of one package with
  the registry applied (no upload/archive/metadata) as the pre-merge gate
- add local/proposal-tracking.R + local/proposal-tracking-lib.R (step 4):
  signature hit rate, proposed-vs-merged, and retirement candidates, with the
  pure helpers covered by tests
- teach validate-patches.R optional PATCH_DIR/REGISTRY_FILE overrides so a
  candidate registry can be validated without touching the real one
- document the propose/trial-build/tracking workflow in local/patches/README.md
2026-07-14 15:01:55 +00:00

310 lines
11 KiB
R

# Pure, side-effect-free helpers for triaging `single_builds` failures:
# normalise a raw `error_text` into a stable fingerprint, and classify it
# against a seed set of known failure signatures (issue #115, steps 1 + 2).
#
# Kept free of DB/IO so it can be sourced by both `failing-builds-report.R`
# and the unit tests in `local/tests/`.
# ---------------------------------------------------------------------------
# Signature table
# ---------------------------------------------------------------------------
# Each rule maps a recurring compile/link/load error to a suggested fix tier.
# `pattern` is a case-insensitive regex matched against the raw `error_text`.
# `auto` marks whether the fix is a *known lever* safe to auto-propose as a PR
# (env / makevars / an already-curated package-specific patch). Rules that
# would require a brand-new source diff for a previously-unseen package stay
# `auto = FALSE` -> classified, but always routed to human triage, per the
# issue's guardrail against shipping autonomous novel source diffs.
#
# Seeded from the existing registry entries and known recurring failures; add
# a row here as new signatures are confirmed. Order matters: the first match
# wins, so keep more specific patterns above broader ones.
build_signatures <- function() {
list(
list(
id = "tbb-stddef-removed",
label = "removed TBB header tbb/tbb_stddef.h",
pattern = "tbb/tbb_stddef\\.h.*No such file",
tier = "makevars",
confidence = "high",
auto = TRUE,
fix = "add CPPFLAGS += -DTBB_INTERFACE_NEW so the source stops including the removed tbb/tbb_stddef.h header",
example = "StanHeaders / rstan (#114)",
registry = list(
env = NULL,
configure_args = NULL,
makevars = list(CPPFLAGS = "-DTBB_INTERFACE_NEW"),
patch = NULL,
reason = "package includes the removed tbb/tbb_stddef.h; -DTBB_INTERFACE_NEW selects the new oneTBB interface path"
)
),
list(
id = "rcppparallel-bundled-tbb",
label = "bundled Intel TBB build fails/hangs (musl / new g++)",
pattern = "USE_TBB[^\\n]*(not supported|unsupported)|RcppParallel[^\\n]*TBB|tbb[^\\n]*(Alpine|musl)",
tier = "patch",
confidence = "high",
auto = TRUE,
fix = "apply the curated RcppParallel/disable-tbb.patch so the bundled TBB build is skipped and the TinyThread backend is used",
example = "RcppParallel",
registry = list(
env = NULL,
configure_args = NULL,
makevars = NULL,
patch = "RcppParallel/disable-tbb.patch",
reason = "bundled Intel TBB build hangs/fails on musl (Alpine) and newer toolchains; patch forces the TinyThread backend"
)
),
list(
id = "system-libuv-link-leak",
label = "binary links system libuv (NEEDED libuv.so.1)",
pattern = "libuv\\.so",
tier = "patch",
confidence = "medium",
# A novel per-package source diff is required to force the vendored lib;
# never auto-propose, only surface for a human (guardrail).
auto = FALSE,
fix = "force the vendored/static library instead of the system one via a human-authored source patch (see fs/force-vendored-libuv.patch as precedent)",
example = "fs",
registry = list(
env = NULL,
configure_args = NULL,
makevars = NULL,
patch = "<package>/force-vendored-<lib>.patch",
reason = "binary links the system library and fails to dyn.load on consumer machines; force the vendored/static build"
)
)
)
}
# ---------------------------------------------------------------------------
# Normalisation
# ---------------------------------------------------------------------------
# Collapse build-specific noise (temp paths, version numbers, hex addresses,
# the package name) so the same root cause across packages/platforms/versions
# maps to one fingerprint bucket.
normalise_error <- function(error_text, package = NULL) {
if (length(error_text) == 0L || is.na(error_text) || !nzchar(error_text)) {
return("")
}
x <- as.character(error_text)
# Package-specific token first (before version/number stripping mangles it).
if (!is.null(package) && length(package) == 1L && nzchar(package)) {
# \Q..\E quotes the name literally so metachars (e.g. data.table's dot)
# are matched verbatim rather than as regex.
x <- gsub(paste0("\\b\\Q", package, "\\E\\b"), "<pkg>", x, perl = TRUE)
}
# R temp dirs/files: /tmp/RtmpAbC123, RtmpXXXX, /tmp/Rtmp.../file123.
x <- gsub("/tmp/[^ \t\n]*", "<tmp>", x, perl = TRUE)
x <- gsub("\\bRtmp[A-Za-z0-9]+", "Rtmp<x>", x, perl = TRUE)
# Hex addresses and version-like number runs.
x <- gsub("0x[0-9a-fA-F]+", "0x<addr>", x, perl = TRUE)
x <- gsub("[0-9]+(\\.[0-9]+)+", "<v>", x, perl = TRUE)
x <- gsub("\\b[0-9]{2,}\\b", "<n>", x, perl = TRUE)
# Whitespace and case.
x <- tolower(x)
x <- gsub("[ \t\r\n]+", " ", x, perl = TRUE)
trimws(x)
}
# Extract the single most informative line from a multi-line error, then
# normalise it. This is the grouping key; a short salient line groups far
# better than the whole (often huge) transcript.
fingerprint_error <- function(error_text, package = NULL, max_chars = 200L) {
if (length(error_text) == 0L || is.na(error_text) || !nzchar(error_text)) {
return("<empty>")
}
lines <- strsplit(as.character(error_text), "\n", fixed = TRUE)[[1L]]
lines <- trimws(lines)
lines <- lines[nzchar(lines)]
if (length(lines) == 0L) {
return("<empty>")
}
salient_re <- paste(
"error:",
"fatal error:",
"no such file",
"undefined reference",
"cannot find -l",
"cannot open shared object",
"configuration failed",
"non-zero exit",
"installation of package",
"compilation failed",
sep = "|"
)
hit <- lines[grepl(salient_re, lines, ignore.case = TRUE)]
chosen <- if (length(hit) > 0L) hit[[1L]] else lines[[length(lines)]]
fp <- normalise_error(chosen, package)
if (nchar(fp) > max_chars) {
fp <- paste0(substr(fp, 1L, max_chars), "...")
}
fp
}
# ---------------------------------------------------------------------------
# Classification
# ---------------------------------------------------------------------------
# Return the first matching signature (as a list) enriched with `matched`, or
# the unclassified fallback. Never guesses: an unmatched error is routed to a
# human, not assigned a fix.
classify_error <- function(error_text, signatures = build_signatures()) {
txt <- if (length(error_text) == 0L || is.na(error_text)) {
""
} else {
as.character(error_text)
}
for (sig in signatures) {
if (
nzchar(txt) && grepl(sig$pattern, txt, ignore.case = TRUE, perl = TRUE)
) {
sig$matched <- TRUE
return(sig)
}
}
list(
id = "unclassified",
label = "unknown signature",
tier = NA_character_,
confidence = NA_character_,
auto = FALSE,
fix = "no known signature; flag for human triage",
example = NA_character_,
registry = NULL,
matched = FALSE
)
}
# Build a suggested registry.json entry (as an R list) for a classified group,
# filling package/versions/platforms from the observed failures. Only
# meaningful when the signature carries a `registry` template.
propose_registry_entry_list <- function(
signature,
package,
platforms,
versions = "*"
) {
if (is.null(signature$registry)) {
return(NULL)
}
tmpl <- signature$registry
entry <- list(
package = package,
versions = versions,
# I() keeps this a JSON array even when a single platform is affected.
platforms = I(sort(unique(as.character(platforms))))
)
for (k in c("env", "configure_args", "makevars", "patch")) {
if (!is.null(tmpl[[k]])) {
entry[[k]] <- tmpl[[k]]
}
}
entry$reason <- tmpl$reason
entry
}
# Same, rendered as a pretty JSON string.
propose_registry_entry <- function(
signature,
package,
platforms,
versions = "*"
) {
entry <- propose_registry_entry_list(signature, package, platforms, versions)
if (is.null(entry)) {
return(NULL)
}
jsonlite::toJSON(entry, auto_unbox = TRUE, pretty = TRUE, null = "null")
}
# Resolve the representative signature for a group by its id, re-attaching the
# `matched` flag the report/proposer rely on. Unknown ids -> unclassified.
resolve_signature <- function(sig_id, signatures = build_signatures()) {
hit <- Filter(function(s) s$id == sig_id, signatures)
if (length(hit) > 0L) {
s <- hit[[1L]]
s$matched <- TRUE
s
} else {
classify_error("", signatures) # unclassified fallback (matched = FALSE)
}
}
# ---------------------------------------------------------------------------
# Triage report (shared by the report printer and the patch proposer)
# ---------------------------------------------------------------------------
# `failures` is a data.frame with at least: name, platform, arch, error_text.
# `registered_pkgs` is the set of packages that already carry a registry entry.
# Returns a list of group records (one per root-cause bucket), ordered by
# number of affected builds descending. Pure: no IO, no printing.
build_triage_report <- function(
failures,
registered_pkgs = character(0L),
signatures = build_signatures()
) {
if (nrow(failures) == 0L) {
return(list())
}
idx <- seq_len(nrow(failures))
failures$fingerprint <- vapply(
idx,
function(i) fingerprint_error(failures$error_text[[i]], failures$name[[i]]),
character(1L)
)
failures$sig_id <- vapply(
idx,
function(i) classify_error(failures$error_text[[i]], signatures)$id,
character(1L)
)
# Group by root cause: classified failures collapse by signature id (same fix
# candidate is one bucket regardless of log noise); unclassified failures fall
# back to the fingerprint so distinct unknowns stay separate for discovery.
failures$group_key <- ifelse(
failures$sig_id == "unclassified",
failures$fingerprint,
failures$sig_id
)
groups <- split(failures, failures$group_key)
groups <- groups[order(-vapply(groups, nrow, integer(1L)))]
lapply(unname(groups), function(g) {
sig_id <- names(sort(table(g$sig_id), decreasing = TRUE))[[1L]]
sig <- resolve_signature(sig_id, signatures)
fp_tab <- sort(table(g$fingerprint), decreasing = TRUE)
pkgs <- sort(unique(g$name))
plats <- sort(unique(g$platform))
arches <- sort(unique(g$arch))
unregistered <- setdiff(pkgs, registered_pkgs)
auto_proposable <- isTRUE(sig$auto) && sig$matched
proposed <- list()
if (auto_proposable) {
for (p in unregistered) {
proposed[[p]] <- propose_registry_entry_list(
sig,
p,
g$platform[g$name == p]
)
}
}
list(
signature = sig$id,
label = sig$label,
matched = sig$matched,
auto_proposable = auto_proposable,
tier = sig$tier,
confidence = sig$confidence,
suggested_fix = sig$fix,
fingerprint = names(fp_tab)[[1L]],
fingerprint_variants = length(fp_tab),
build_count = nrow(g),
packages = pkgs,
packages_without_entry = unregistered,
platforms = plats,
arches = arches,
proposed_entries = if (length(proposed) > 0L) proposed else NULL
)
})
}