build-cran-binaries/local/patches/RcppParallel/force-bundled-tbb-6.2.x.patch
pat-s 40a0a6e02d
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fix(patches): cover every RcppParallel 6.x release with the bundled-TBB patch (#228)
2026-10-04 07:35:01 +00:00

142 lines
6 KiB
Diff

diff --git a/R/aaa.R b/R/aaa.R
index 568a2aa..2744059 100644
--- a/R/aaa.R
+++ b/R/aaa.R
@@ -5,4 +5,21 @@ TBB_LIB <- ""
TBB_INC <- ""
TBB_NAME <- "tbb"
-TBB_MALLOC_NAME <- "tbbmalloc"
\ No newline at end of file
+TBB_MALLOC_NAME <- "tbbmalloc"
+
+# bincraft patch: build images (ours did until build-env-images c51ed09) and
+# plenty of user environments export TBB_ROOT / TBB_LIB / TBB_INC. A binary we
+# publish always carries its own oneTBB in RcppParallel/lib -- see the
+# companion changes in tools/config/configure.R and src/install.libs.R -- so
+# honouring those variables at run time is actively harmful: .onLoad() would
+# dyn.load() a second, unrelated TBB into the process next to the bundled one
+# (two copies of the same symbols in the global scope, which segfaults R on
+# load), and RcppParallelLibs() / CxxFlags() would hand that system TBB to
+# dependents such as rstan, putting NEEDED libtbb.so.12 back into their
+# binaries. Read the variables only when explicitly opted back in.
+bincraftGetenv <- function(name, unset = "") {
+ if (Sys.getenv("BINCRAFT_ALLOW_SYSTEM_TBB", unset = "FALSE") == "TRUE")
+ Sys.getenv(name, unset = unset)
+ else
+ unset
+}
\ No newline at end of file
diff --git a/R/tbb.R b/R/tbb.R
index b071833..e3bf7a5 100644
--- a/R/tbb.R
+++ b/R/tbb.R
@@ -19,3 +19,3 @@ tbbLibraryPath <- function(name = NULL) {
# find root for TBB install
- tbbRoot <- Sys.getenv("TBB_LIB", unset = tbbRoot())
+ tbbRoot <- bincraftGetenv("TBB_LIB", unset = tbbRoot())
if (is.null(name))
@@ -63,3 +63,3 @@ tbbCxxFlags <- function() {
# if TBB_INC is set, apply those library paths
- tbbInc <- Sys.getenv("TBB_INC", unset = TBB_INC)
+ tbbInc <- bincraftGetenv("TBB_INC", unset = TBB_INC)
if (!file.exists(tbbInc)) {
@@ -122,3 +122,3 @@ tbbLdFlags <- function() {
# shortcut if TBB_LIB defined
- tbbLib <- Sys.getenv("TBB_LINK_LIB", Sys.getenv("TBB_LIB", unset = TBB_LIB))
+ tbbLib <- bincraftGetenv("TBB_LINK_LIB", bincraftGetenv("TBB_LIB", unset = TBB_LIB))
if (nzchar(tbbLib)) {
diff --git a/src/install.libs.R b/src/install.libs.R
index 3b3cfda..c0e6f3e 100644
--- a/src/install.libs.R
+++ b/src/install.libs.R
@@ -477,6 +477,18 @@ prependFlags <- function(prependFlags, toFlags) {
tbbLib <- Sys.getenv("TBB_LIB")
tbbInc <- Sys.getenv("TBB_INC")
+# bincraft patch: the companion change in tools/config/configure.R stops an
+# ambient TBB_LIB / TBB_INC from selecting a system TBB, but this script is
+# also run directly by `R CMD INSTALL` (not only through the `tbb` rule in
+# src/Makevars, which passes the configured values), so at install time it
+# still sees the image's environment and would symlink the system libraries
+# into RcppParallel/lib. Drop them here for the same reason, under the same
+# opt-out.
+if (Sys.getenv("BINCRAFT_ALLOW_SYSTEM_TBB", unset = "FALSE") != "TRUE") {
+ tbbLib <- ""
+ tbbInc <- ""
+}
+
args <- commandArgs(trailingOnly = TRUE)
if (identical(args, "build")) {
if (nzchar(tbbLib) && nzchar(tbbInc)) {
diff --git a/tools/config/configure.R b/tools/config/configure.R
index c203a1f..0050b5c 100644
--- a/tools/config/configure.R
+++ b/tools/config/configure.R
@@ -79,6 +79,24 @@ tbbRoot <- Sys.getenv("TBB_ROOT", unset = NA)
tbbLib <- Sys.getenv("TBB_LIB", unset = NA)
tbbInc <- Sys.getenv("TBB_INC", unset = NA)
+# bincraft patch: ignore an ambient TBB_ROOT / TBB_LIB / TBB_INC. Our build
+# images exported these until build-env-images c51ed09 (a leftover from
+# RcppParallel 5.x, whose bundled Intel TBB would not build on musl or with
+# modern g++), and any of them switches the branches below to a system TBB.
+# The published binary then records NEEDED libtbb.so.12 (or libtbb.so.2 for
+# the classic Intel TBB) and gets a RcppParallel/lib full of absolute symlinks
+# into the image's library dir, so it cannot dyn.load on a consumer machine
+# without that exact TBB. 6.x bundles oneTBB 2022 and builds it with cmake on
+# every platform we ship, so the bundled copy is always the right choice here;
+# forcing it in the package rather than relying on the image environment keeps
+# the binary correct whichever image version CI happens to pull. Set
+# BINCRAFT_ALLOW_SYSTEM_TBB=TRUE to restore the upstream behaviour.
+if (Sys.getenv("BINCRAFT_ALLOW_SYSTEM_TBB", unset = "FALSE") != "TRUE") {
+ tbbRoot <- NA
+ tbbLib <- NA
+ tbbInc <- NA
+}
+
tbbName <- Sys.getenv("TBB_NAME", unset = "tbb")
tbbMallocName <- Sys.getenv("TBB_MALLOC_NAME", unset = "tbbmalloc")
@@ -225,12 +243,23 @@ define(
)
# set PKG_LIBS
+#
+# bincraft patch: the library directories below are passed as plain '-L', not
+# '-Wl,-L'. gcc expands its own search dirs (/usr/lib64, /usr/lib/<triplet>)
+# into explicit '-L' options ahead of anything forwarded verbatim with '-Wl,',
+# so with '-Wl,-L' a system libtbb.so wins over the one named here: on a build
+# host with a distro TBB installed, '-ltbb' resolves to that library and
+# RcppParallel.so records its SONAME (libtbb.so.12, or libtbb.so.2 for the
+# classic Intel TBB) instead of the bundled 'libtbb.so'. The binary then loads
+# the system TBB rather than the copy shipped in RcppParallel/lib, and fails
+# outright on a machine that has no system TBB. gcc places a plain '-L' before
+# its built-in dirs, so the intended library is found first.
pkgLibs <- if (!is.na(tbbLib)) {
# a TBB supplied via TBB_LIB / TBB_ROOT. an rpath is meaningless on Windows,
# where the loader has no equivalent -- see R/zzz.R for how we resolve there
c(
- "-Wl,-L\"$(TBB_LIB)\"",
+ "-L\"$(TBB_LIB)\"",
if (.Platform$OS.type != "windows")
sprintf("-Wl,-rpath,%s", shQuote(tbbLib)),
"-l$(TBB_NAME)",
@@ -240,14 +269,14 @@ pkgLibs <- if (!is.na(tbbLib)) {
} else if (R.version$os == "emscripten") {
c(
- "-Wl,-Ltbb/build/lib_release",
+ "-Ltbb/build/lib_release",
"-l$(TBB_NAME)"
)
} else {
c(
- "-Wl,-Ltbb/build/lib_release",
+ "-Ltbb/build/lib_release",
"-l$(TBB_NAME)",
"-l$(TBB_MALLOC_NAME)"
)