pat-s
270843eaf9
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Move packages-to-build.R execution to the single install-deps step and save results as RDS. Matrix jobs read the precomputed list instead of loading the massive CRAN archive/release databases, freeing memory for fork/system calls.
57 lines
2 KiB
YAML
57 lines
2 KiB
YAML
when:
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- event: manual
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evaluate: 'task == "build-all-amd64" || task == "build-all-arm64"'
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skip_clone: true
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labels:
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platform: linux/${ARCH}
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agent: artemis
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steps:
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- name: 'Install deps and bincraft'
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image: reg.devxy.io/rpkgs/build-env-${OS}:${OS_VERSION}-${R_VERSION}
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pull: true
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environment:
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REPO_RO_TOKEN:
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from_secret: REPO_RO_TOKEN
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GITHUB_PAT:
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from_secret: GITHUB_PAT
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B2_S3_ACCESS_KEY:
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from_secret: B2_S3_ACCESS_KEY
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B2_S3_SECRET_KEY:
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from_secret: B2_S3_SECRET_KEY
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PGPASS:
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from_secret: PGPASS
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R_PKG_CACHE_DIR: /mnt/cache/pkgcache
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R_LIBS_USER: /mnt/cache/R-pkgs
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CCACHE_DIR: /mnt/cache/ccache
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volumes:
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- ${ARCH}-binaries-r-dep-cache-${OS}-${OS_VERSION//./}:/mnt/cache
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commands:
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# one-time full wipe to fix corrupted .so files from previous failed builds
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- rm -rf /mnt/cache/R-pkgs
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- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
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- git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git .
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- git clone -q https://codefloe.com/rpkgs/bincraft.git /tmp/bincraft
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- R -q -e 'pak::cache_clean(); pak::sysreqs_db_update(); pak::local_install("/tmp/bincraft"); pak::pak(c("RPostgres", "s3fs", "data.table", "future")); packageVersion("bincraft")'
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- R -q -e "source('local/packages-to-build.R'); saveRDS(pkgs, '/mnt/cache/packages/pkgs_to_build.rds'); sprintf('Precomputed %s packages to build', length(pkgs))"
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backend_options:
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docker:
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resources:
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requests:
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memory: 5Gi
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cpu: 1000m
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kubernetes:
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resources:
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requests:
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memory: 5Gi
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cpu: 1000m
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nodeSelector:
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kubernetes.io/arch: ${ARCH}
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node.kubernetes.io/instance-type: ${K8S_INSTANCE_TYPE}
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tolerations:
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- key: 'CI'
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operator: 'Equal'
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value: 'true'
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effect: 'NoSchedule'
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