48 lines
1.7 KiB
Shell
48 lines
1.7 KiB
Shell
#!/bin/bash
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### install R
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PLATFORM_ID=$(cat /etc/os-release | grep 'PLATFORM_ID=' | cut -d'=' -f2 | tr -d '"')
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if [ $PLATFORM_ID = "platform:el9" ]; then
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subscription-manager register --username pat-s --password $RED_HAT_DEV_PW
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subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms
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dnf -y install git rsync
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echo "R Version: ${R_VERSION}"
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echo "Downloading R-${R_VERSION}.rpm from S3..."
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curl -o /tmp/R-${R_VERSION}.rpm https://cynkra-r-builds-arm64.s3.eu-central-1.amazonaws.com/el9/R-"${R_VERSION}"-1-1."$(arch)".rpm
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dnf install -y /tmp/R-${R_VERSION}.rpm
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elif [ $PLATFORM_ID = "platform:el8" ]; then
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subscription-manager register --username pat-s --password $RED_HAT_DEV_PW
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subscription-manager repos --enable codeready-builder-for-rhel-8-$(arch)-rpms
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dnf -y install git rsync
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echo "R Version: ${R_VERSION}"
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echo "Downloading R-${R_VERSION}.rpm from S3..."
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curl -o /tmp/R-${R_VERSION}.rpm https://cynkra-r-builds-arm64.s3.eu-central-1.amazonaws.com/el8/R-"${R_VERSION}"-1-1."$(arch)".rpm
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dnf install -y /tmp/R-${R_VERSION}.rpm
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fi
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export PATH=/opt/R/${R_VERSION}/bin:$PATH
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### install R packages needed for building
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R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/stable/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch))'
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R -q -e 'options(repos = c(CRAN="https://stat.ethz.ch/CRAN/")); pak::pak(c("pkgbuild", "cranlike"))'
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### install awscli
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# curl -s "https://awscli.amazonaws.com/awscli-exe-linux-aarch64.zip" -o "awscliv2.zip"
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# unzip -qq awscliv2.zip
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# ./aws/install
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# rm -rf awscliv2.zip
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# mkdir /root/.aws
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# echo -e "[default]\n
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# aws_access_key_id=AKIATHTKSC6FRVE5LNE7\n
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# aws_secret_access_key=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\n" >/root/.aws/credentials
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