when: - event: [cron] cron: process-cran-updates-redhat-9-arm64 - event: manual evaluate: 'process_cran_updates == "all"' - event: manual evaluate: 'process_cran_updates == "redhat-9-arm64"' skip_clone: true steps: - name: 'Processing Updates' image: docker.io/devxygmbh/rpkgs-build-env-redhat:9-4.4.3 pull: true environment: RED_HAT_DEV_PW: from_secret: RED_HAT_DEV_PW HETZNER_S3_ACCESS_KEY_K3S: from_secret: HETZNER_S3_ACCESS_KEY_K3S HETZNER_S3_SECRET_KEY_K3S: from_secret: HETZNER_S3_SECRET_KEY_K3S PGPASS: from_secret: PGPASS GIT_RO_TOKEN: from_secret: GIT_RO_TOKEN GITHUB_PAT: from_secret: GITHUB_PAT # normal env vars GIT_USER: pat-s NTFY_SERVER: from_secret: NTFY_SERVER NTFY_TOPIC: from_secret: NTFY_TOPIC NTFY_AUTH: TRUE NTFY_PASSWORD: from_secret: ntfy_token # set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-9 ARCH: arm64 NCPUS: 2 INTERVAL: lubridate::interval(lubridate::today() - 6, lubridate::today() - 3) # volumes: # - arm64-binaries-r-dep-cache-redhat-9:/mnt/cache commands: - git clone -q https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraft /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres /mnt/cache/R-pkgs/bincraft - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - R -q -e 'packageVersion("bincraft")' - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages # options(future.globals.onReference = NULL): for some reason s3fs::file_delete() throws 'Error: Detected a non-exportable reference ('externalptr') in one of the globals ('FUN' of class 'function') used in the future expression' otherwise - xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = 'error', repos = structure(c(getOption('repos'),INLA='https://inla.r-inla-download.org/R/stable'))); progressr::handlers('cli'); progressr::handlers(global = TRUE); options(future.globals.onReference = NULL); bincraft::process_cran_updates(interval = $INTERVAL, platform = 'redhat-9', process_updated = TRUE, process_new = TRUE, process_removed = TRUE, s3_endpoint = 'https://hel1.your-objectstorage.com', s3_region = 'hel1', s3_bucket = 'devxy-r-package-binaries-hel1', s3_access_key_id = Sys.getenv('HETZNER_S3_ACCESS_KEY_K3S'), s3_secret_access_key = Sys.getenv('HETZNER_S3_SECRET_KEY_K3S'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'r_binaries', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE)" backend_options: kubernetes: resources: requests: memory: 5Gi cpu: 3000m limits: memory: 14Gi cpu: 3000m nodeSelector: node.kubernetes.io/instance-type: cax31 kubernetes.io/arch: arm64 tolerations: - key: 'CI' operator: 'Equal' value: 'true' effect: 'NoSchedule' - name: 'ntfy' image: binwiederhier/ntfy:v2.12.0 when: - status: [failure] environment: NTFY_TOKEN: from_secret: ntfy_token commands: | ntfy publish --tags=no_entry_sign --token $NTFY_TOKEN -t "Run '${CI_REPO}' failed" --click="${CI_PIPELINE_URL}" --actions="view, Open build, ${CI_PIPELINE_URL}, clear=true;" ntfy.devxy.io/ci-builds Workflow: ${CI_WORKFLOW_NAME} Commit message: ${CI_COMMIT_MESSAGE} Commit Author: ${CI_COMMIT_AUTHOR}