Author	SHA1	Message	Date
pat-s	8c5362b7ab	refactor: R_VERSION syntax	2026-05-27 22:36:09 +02:00
pat-s	6faa3772d1	refactor(ci): use multi-R-version images across workflows (#70) ... ## Summary - Switches all 64 `.crow/*.yaml` workflows, the `Justfile`, and the commented-out `build-all-versions-install-deps.yaml` template to the new multi-R-version container images. - Each image tag drops `-${R_VERSION}` (e.g. `build-env-alpine:3.22-4.5` → `build-env-alpine:3.22`); workflows pick an R version by calling `/opt/R/${R_VERSION}/bin/R` explicitly. - Pattern-1 workflows (hard-coded image tag) gain a single `R_VERSION:` env var per file. - Pattern-2 workflows (`build-all-versions-*`, matrix-driven) continue to receive `R_VERSION` via `crow pipeline create --var`. ## Platform → R_VERSION mapping | Platform | Image | R_VERSION | | --- | --- | --- | | alpine 3.22 / 3.23 | `build-env-alpine:3.{22,23}` | 4.5.3 | | ubuntu jammy / noble | `build-env-ubuntu:{jammy,noble}` | 4.4.3 | | redhat 8 / 9 | `build-env-redhat:{8,9}` | 4.4.3 | | redhat 10 | `build-env-redhat:10` | 4.5.3 | The `alpine-321` audit-only workflows fall back to `build-env-alpine:3.23` since no 3.21 image exists in the new scheme; the audits only query S3/CRAN, so the container OS does not affect correctness. ## Bug fixes folded in 1. All six `weekly-audit-missing-alpine-*.yaml` files were pinned to `alpine:3.23-4.5` regardless of platform. Now each one points at its own alpine image. 2. All fourteen `update-package-index-*.yaml` files were pinned to `build-env-ubuntu:noble-4.4` (or `noble-4.5` for `redhat-10-amd64`) regardless of platform. Now each one uses its own platform's image. 3. `process-updates-ubuntu-2404-{amd64,arm64}.yaml` had `R_VERSION` of `4.4` (no patch) baked into the tag. Aligned to `4.4.3`, matching the audit and rebuild counterparts. ## Smoke targets (post-merge) One workflow per shape, ready to dry-run: - `process-updates-alpine-322-amd64.yaml` - `weekly-rebuild-missing-redhat-9-amd64.yaml` - `weekly-audit-missing-ubuntu-2204-amd64.yaml` - `update-package-index-redhat-10-amd64.yaml` - `archive-missed-packages.yaml` - `build-all-versions-amd64.yaml` (with its install-deps predecessor) - `build-r-minor-sensitive-packages.yaml` ## Follow-ups (out of scope, surfaced during review) - `process-updates-redhat-10-{amd64,arm64}.yaml` set `codename = "rhel9"` in their `upload_package_index(...)` calls. Pre-existing bug — should be `"rhel10"`. The `update-package-index-redhat-10-*` counterparts already use `"rhel10"` correctly. - `update-package-index-redhat-8-amd64.yaml` is missing the `packageVersion("bincraft")` diagnostic line that every sibling file has. Pre-existing asymmetry between amd64 and arm64. ## Spec & plan - Spec: `docs/superpowers/specs/2026-05-25-multi-r-version-images-design.md` - Plan: `docs/superpowers/plans/2026-05-25-multi-r-version-images.md` Reviewed-on: #70	2026-05-26 08:51:27 +00:00
pat-s	0aba224c11	fix: install bincraft to per-job /tmp/R-libs to avoid shared cache conflicts between parallel matrix builds	2026-04-09 23:41:41 +02:00
pat-s	0efe1d3485	fix: remove cached bincraft dir before install to avoid pak metadata conflict	2026-04-09 23:37:40 +02:00
pat-s	978eb42e2a	fix: skip dependency upgrades when installing bincraft with pak::local_install()	2026-04-09 23:33:29 +02:00
pat-s	7d58aa7e59	fix: use pak::local_install() from cloned path to avoid git URL resolution bug	2026-04-09 23:27:50 +02:00
pat-s	fee3e4ca94	fix: install bincraft via git clone + R CMD INSTALL --no-deps to avoid dependency rebuild and lock conflicts	2026-04-09 23:25:49 +02:00
pat-s	9ce6b0b4e1	fix: remove old bincraft before reinstall to avoid RemoteType metadata conflict	2026-04-09 23:24:30 +02:00
pat-s	3fbf4ca1f8	fix: force reinstall bincraft to bypass RemoteType mismatch with pak	2026-04-09 23:22:47 +02:00
pat-s	2f81bd6be5	fix: clean stale R package lock dirs before installing bincraft ... Parallel matrix jobs sharing /mnt/cache/R-pkgs leave stale 00LOCK-* dirs that block subsequent installs.	2026-04-09 23:21:12 +02:00
pat-s	1b24fa731a	fix: install remotes package if missing before installing bincraft	2026-04-09 23:19:53 +02:00
pat-s	c9040ee50a	fix: use remotes::install_git() instead of pak::pak() for bincraft installation ... pak::pak() with git:: URLs fails with "subscript out of bounds" in the build environment.	2026-04-09 23:18:59 +02:00
pat-s	36c69e983f	chore: always update bincraft at build start instead of using cached version	2026-04-09 23:16:35 +02:00
pat-s	688c299138	chore: redirect stderr to stdout in build commands to surface R errors	2026-04-09 23:01:40 +02:00
pat-s	dae04820f8	fix: add -- separator to xwfb-run invocations to prevent flag interception ... xwfb-run uses argparse and was consuming R's -q flag as its own argument, causing build failures.	2026-04-09 22:51:37 +02:00
pat-s	0f8d36cb51	chore: use xwfb-run conditionally for RHEL 10 support	2026-03-24 11:31:23 +01:00
pat-s	e959d9743f	refactor: migrate to backblaze	2026-03-22 00:32:03 +01:00
pat-s	510bff292a	ci: GIT_RO_TOKEN -> REPO_RO_TOKEN	2025-10-17 14:45:07 +02:00
pat-s	30753d8871	use new postgres db and user	2025-06-25 15:53:40 +02:00
pat-s	9e00f4caa3	chore: update links, remove duplicated pak install	2025-06-11 20:18:24 +02:00