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normal run again

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This commit is contained in:
Patrick Schratz 2024-07-29 16:16:43 +02:00
commit f47835fb8d
Signed by: pat-s
GPG key ID: 3C6318841EF78925
2 changed files with 17 additions and 13 deletions
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28
.woodpecker/build.yaml
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@ -6,7 +6,7 @@ skip_clone: true
matrix:
include:
- PLATFORM: rhel-9
BLOCK: 903:920
BLOCK: 903:1450
# - PLATFORM: rhel-9
# BLOCK: 1051:1450
# - PLATFORM: rhel-9
@ -46,23 +46,25 @@ steps:
# more complicated system dependencies which pak cannot resolve
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
# set additional repos: important as otherwise some packages cannot be resolved (e.g. INLA). Also: setting our own binary repos so we can make use of them for dep installation at some point
- R -q -e 'options(crayon.enabled = TRUE, Ncpus = 6, future.globals.onReference = "error", repos = structure(c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/stable"))); pkgs = tools::CRAN_package_db()[[1]][${BLOCK}]; library(rBinaries); future::plan("multisession", workers = 6, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = TRUE, force = TRUE))'
- R -q -e 'options(crayon.enabled = TRUE, Ncpus = 6, future.globals.onReference = "error", repos = structure(c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/stable"))); pkgs = tools::CRAN_package_db()[[1]][${BLOCK}]; library(rBinaries); future::plan("multisession", workers = 6, rscript_startup = quote(options(crayon.enabled = TRUE))); foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE))'
backend_options:
kubernetes:
# resources:
# requests:
# memory: 25Gi
# cpu: 12000m
# limits:
# memory: 28Gi
# cpu: 16000m
### PROD
resources:
requests:
memory: 4Gi
cpu: 2000m
memory: 25Gi
cpu: 12000m
limits:
memory: 4Gi
cpu: 2000m
memory: 28Gi
cpu: 16000m
## DEBUG
# resources:
# requests:
# memory: 4Gi
# cpu: 2000m
# limits:
# memory: 4Gi
# cpu: 2000m
nodeSelector:
kubernetes.io/arch: 'arm64'
- name: Upload PACKAGES files

2
R/build_binaries.R
View file

@ -93,6 +93,7 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
p()
dump <- build_single_tag(x, y, dir_out_bin, local_clone_dir, platform = platform, debug = debug)
store_build_metadata(x, y, platform, error_occurred = FALSE, force = force)
cli::cli_alert_success("Successfully built package {.pkg {x}} with tag {.field {y}}.")
con <- DBI::dbConnect(RPostgres::Postgres(),
dbname = "build_metadata", host = "postgres-arm-binaries-r.devxy.io",
@ -122,6 +123,7 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
{
p()
dump <- upload_single_binary_to_s3(package_name = x, tag = y, force = force, build_for_minor = build_for_minor, debug = debug)
cli::cli_alert_success("Successfully uploaded package {.pkg {x}} with tag {.field {y}}.")
},
error = function(e) {
message(sprintf("Error in uploading package %s with tag %s: %s", x, y, e))