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rhel-8: use newer libgit2 sysdep

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This commit is contained in:
Patrick Schratz 2025-01-13 17:03:05 +01:00
commit e51bec4376
Signed by: pat-s
GPG key ID: 3C6318841EF78925
4 changed files with 5 additions and 1 deletions
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1
.woodpecker/process-updates-redhat-8-amd64.yaml
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@ -41,6 +41,7 @@ steps:
commands: commands:
- git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git . - git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git .
- rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres
- rm -rf /mnt/cache/R-pkgs/gert /mnt/cache/R-pkgs/git2r /mnt/cache/R-pkgs/pkgbuild /mnt/cache/R-pkgs/processx /mnt/cache/R-pkgs/curl
- R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")' - R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")'
- R -q -e 'packageVersion("bincraftR")' - R -q -e 'packageVersion("bincraftR")'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages

1
.woodpecker/process-updates-redhat-8-arm64.yaml
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@ -40,6 +40,7 @@ steps:
commands: commands:
- git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git . - git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git .
- rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres
- rm -rf /mnt/cache/R-pkgs/gert /mnt/cache/R-pkgs/git2r /mnt/cache/R-pkgs/pkgbuild /mnt/cache/R-pkgs/processx /mnt/cache/R-pkgs/curl
- R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")' - R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")'
- R -q -e 'packageVersion("bincraftR")' - R -q -e 'packageVersion("bincraftR")'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages

1
.woodpecker/update-package-index-redhat-8-arm64.yaml
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@ -33,6 +33,7 @@ steps:
commands: commands:
- git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git . - git clone https://pat-s:$$GIT_RO_TOKEN@git.devxy.io/devxy/build-binaries.git .
- rm -rf /mnt/cache/packages/* - rm -rf /mnt/cache/packages/*
- rm -rf /mnt/cache/R-pkgs/gert /mnt/cache/R-pkgs/git2r /mnt/cache/R-pkgs/pkgbuild /mnt/cache/R-pkgs/processx /mnt/cache/R-pkgs/curl
- R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")' - R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")'
- R -q -e 'pak::pak("pat-s/cranlike@s3")' - R -q -e 'pak::pak("pat-s/cranlike@s3")'
- R -q -e 'packageVersion("bincraftR")' - R -q -e 'packageVersion("bincraftR")'

3
docker/Containerfile-redhat-8
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@ -33,7 +33,7 @@ RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.n
# ImageMagick-c++-devel ImageMagick-devel: boths are not auto-installed via pak sysreqs # ImageMagick-c++-devel ImageMagick-devel: boths are not auto-installed via pak sysreqs
# mecab-devel: RcppMeCab -> no autodetection yet # mecab-devel: RcppMeCab -> no autodetection yet
# libfftw3-dev: ravetools -> actually auto-detect but somehow doesn't work in container? # libfftw3-dev: ravetools -> actually auto-detect but somehow doesn't work in container?
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel tk-devel automake readline-devel RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2_1.7-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel tk-devel automake readline-devel
### CUSTOM DEPENDENCIES ### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source # These usually are not packaged in OS repositories and need to be installed from source
@ -59,6 +59,7 @@ RUN bash -c 'echo -e "PKG_SYSREQS = TRUE\nPKG_SYSREQS_VERBOSE = TRUE\nPKG_SYSREQ
# these dirs will later be used by the CI with existing mounts # these dirs will later be used by the CI with existing mounts
RUN mkdir -p /mnt/cache/packages /mnt/cache/pkgcache /mnt/cache/R-pkgs RUN mkdir -p /mnt/cache/packages /mnt/cache/pkgcache /mnt/cache/R-pkgs
RUN R -q -e 'install.packages("gert", repos = "cloud.r-project.org")'
RUN R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git", dependencies = TRUE)' RUN R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git", dependencies = TRUE)'
CMD ["/bin/bash"] CMD ["/bin/bash"]