ci: configure hook exclusions and fix README lint (MD040/MD056)

.editorconfig

@@ -11,6 +11,10 @@ insert_final_newline = true
 
 [*.md]
 trim_trailing_whitespace = false
+# Markdown code fences hold verbatim content (logs, snippets) whose
+# indentation must not be forced to the source indent rules.
+indent_style = unset
+indent_size = unset
 
 # Ignore paths
 [/collections/ansible_collections/community/**]

.editorconfig-checker.json

@@ -0,0 +1,8 @@
+{
+  "Exclude": [
+    "^LICENSE\\.md$",
+    "^benchmark/",
+    "^docker/reprex/",
+    "^\\.crow/build-r-minor-sensitive-packages\\.yaml$"
+  ]
+}

.markdownlint-cli2.yaml

@@ -0,0 +1,4 @@
+# Rules live in .markdownlint.yaml; this file only sets cli2 options.
+ignores:
+  - LICENSE.md
+  - docs/superpowers/**

.pre-commit-config.yaml

@@ -1,4 +1,13 @@
 # cSpell:ignore autofix autoupdate
+# Excluded: verbatim GPL license, auxiliary shell scripts with intentional
+# in-string formatting, and the soon-to-be-removed standalone workflow.
+exclude: |
+  (?x)^(
+    LICENSE\.md|
+    benchmark/|
+    docker/reprex/|
+    \.crow/build-r-minor-sensitive-packages\.yaml
+  )
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v6.0.0

.prettierignore

@@ -0,0 +1,2 @@
+LICENSE.md
+.crow/build-r-minor-sensitive-packages.yaml

README.md

@@ -186,19 +186,19 @@ Below is a collection of raw errors observed during the build process:
 
 <details>
 
-```
+```text
 * installing to library '/tmp/Rtmp7WPw19/temp_libpath114b846b58'\n* installing *source* package 'ade4' ...\n** using staged installation\nERROR: a 'NAMESPACE' file is required\n* removing '/tmp/Rtmp7WPw19/temp_libpath114b846b58/ade4'\n"
 ```
 
 Tag does not have a NAMESPACE file and hence cannot be built.
 
-```
+```text
 "* installing to library '/tmp/RtmpLcCitS/temp_libpath1146aabbe92'\nERROR: dependency 'tripack' is not available for package 'alphahull'\n* removing '/tmp/RtmpLcCitS/temp_libpath1146aabbe92/alphahull'\n"
 ```
 
 Dependency not available: Either because the dependency was not declared or errored itself during installation.
 
-```
+```text
  In function '\033[01m\033[KRcpp::List solveRRBLUP(const mat&, const mat&, const mat&)\033[m\033[K':\n\033[01m\033[KMME.cpp:162:61:\033[m\033[K \033[01;31m\033[Kerror: \033[m\033[K'\033[01m\033[KPI\033[m\033[K' was not declared in this scope\n  162 |   double ll = -0.5*(double(optRes[\"objective\"])+df+df*log(2*\033[01;31m\033[KPI\033[m\033[K/df));\n      |                                                             \033[01;31m\033[K^~\033[m\033[K\n\033[01m\033[KMME.cpp:\033[m\033[K In function '\033[01m\033[KRcpp::List solveRRBLUPMV(const mat&, const mat&, const mat&, int, double)\033[m\033[K':\n\033[01m\033[KMME.cpp:277:31:\033[m\033[K \033[01;31m\033[Kerror: \033[m\033[K'\033[01m\033[KPI\033[m\033[K' was not declared in this scope; did you mean '\033[01m\033[KHI\033[m\033[K'?\n  277 |   ll -= double(n*m)/2.0*log(2*\033[01;31m\033[KPI\033[m\033[K);\n      |                               \033[01;31m\033[K^~\033[m\033[K\n      |                               \033[32m\033[KHI\033[m\033[K\nmake: *** [/opt/R/4.4.1/lib/R/etc/Makeconf:204: MME.o] Error 1\nERROR: compilation failed for package 'AlphaSimR'\n* removing '/tmp/RtmpclI5CE/temp_libpath11135d215d5/AlphaSimR'\n
 ```
 
@@ -230,8 +230,8 @@ For others it might be due to exotic external dependencies which require manual
 
 Help in resolving these issues are highly welcome!
 
-| Name          | Platform       | Arch    | Reason                           | Solved via | Date Created | Date Solved |
-| ------------- | -------------- | ------- | -------------------------------- | ---------- | ------------ | ----------- |
+| Name          | Platform       | Arch    | Reason                           | Date Created | Date Solved |
+| ------------- | -------------- | ------- | -------------------------------- | ------------ | ----------- |
 | Apollonius    | redhat-8       |         | gmp missing                      | 2024-11-15   |             |
 | doBy          | alpine-320     | amd     | hangs                            | 2024-11-23   |             |
 | later         | ubuntu 22 & 24 | amd     | hangs for early versions - xfvb? | 2024-11-23   |             |