From c9040ee50aefac0a304b57cd1ba3b567ce2dcc41 Mon Sep 17 00:00:00 2001 From: pat-s Date: Thu, 9 Apr 2026 23:18:59 +0200 Subject: [PATCH] fix: use remotes::install_git() instead of pak::pak() for bincraft installation pak::pak() with git:: URLs fails with "subscript out of bounds" in the build environment. --- .crow/build-all-versions-amd64.yaml | 2 +- .crow/build-r-minor-sensitive-packages.yaml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.crow/build-all-versions-amd64.yaml b/.crow/build-all-versions-amd64.yaml index d2249fa..ddea223 100644 --- a/.crow/build-all-versions-amd64.yaml +++ b/.crow/build-all-versions-amd64.yaml @@ -64,7 +64,7 @@ steps: - ${ARCH}-binaries-r-dep-cache-${OS}-${OS_VERSION//./}:/mnt/cache commands: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git"); packageVersion("bincraft")' + - R -q -e 'remotes::install_git("https://codefloe.com/rpkgs/bincraft.git"); packageVersion("bincraft")' - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages # Windows-only: 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd', 'rFUSION', 'MediaNews', 'rFUSION', 'MediaNews' # pkgs = readRDS('/mnt/cache/pkgs_amd64.rds'); diff --git a/.crow/build-r-minor-sensitive-packages.yaml b/.crow/build-r-minor-sensitive-packages.yaml index 227b8e6..7988b65 100644 --- a/.crow/build-r-minor-sensitive-packages.yaml +++ b/.crow/build-r-minor-sensitive-packages.yaml @@ -58,7 +58,7 @@ steps: STRATEGY: sequential commands: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git"); packageVersion("bincraft")' + - R -q -e 'remotes::install_git("https://codefloe.com/rpkgs/bincraft.git"); packageVersion("bincraft")' - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run) - $XVFB -- R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pak::sysreqs_db_update(); pkgs = bincraft::get_r_minor_sensitive_packages(r_minor_packages_issue_url = 'https://git.devxy.io/api/v1/repos/devxy/build-cran-binaries/issues/29'); foo = lapply(pkgs, function(x) bincraft::build_binary_package(x, is_debug = FALSE, is_r_minor_sensitive = TRUE, force = FALSE, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE))" 2>&1