add force parameter
This commit is contained in:
parent
7610e0507b
commit
c42e2be4a6
3 changed files with 36 additions and 57 deletions
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@ -1,7 +1,7 @@
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#' @importFrom DBI dbConnect dbDisconnect dbWriteTable dbGetQuery dbExecute
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#' @importFrom DBI dbConnect dbDisconnect dbWriteTable dbGetQuery dbExecute
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store_build_metadata <- function(
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store_build_metadata <- function(
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package_name, tag, platform,
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package_name, tag, platform,
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error_occurred, error) {
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error_occurred, error, force = FALSE) {
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# s3 <- paws.storage::s3(config = list(
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# s3 <- paws.storage::s3(config = list(
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# endpoint = "https://s3.eu-central-003.backblazeb2.com",
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# endpoint = "https://s3.eu-central-003.backblazeb2.com",
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# region = "eu-central-003"
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# region = "eu-central-003"
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@ -15,28 +15,6 @@ store_build_metadata <- function(
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port = 15432, user = "arm_binaries", password = Sys.getenv("PGPASS")
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port = 15432, user = "arm_binaries", password = Sys.getenv("PGPASS")
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)
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)
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# NB: helper fun which should only be commented in if a new column in the DB is needed!
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# columns_to_add <- list(
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# c("average_build_time_per_tag", "REAL")
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# )
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# for (column in columns_to_add) {
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# add_column_if_not_exists("/tmp/metadata.sqlite", "metadata_summary", column[1], column[2])
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# }
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# dbExecute(con, "BEGIN TRANSACTION")
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# Create the "metadata" table if it does not exist
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# dbExecute(con, "CREATE TABLE IF NOT EXISTS single_builds (
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# package_name TEXT,
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# tag TEXT,
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# platform TEXT,
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# error_occurred BOOLEAN,
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# build_timestamp TEXT,
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# build_duration REAL
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# )")
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# columns added after initial DB creation
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# Create an index on the package_name and tag columns
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# Create an index on the package_name and tag columns
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dbExecute(con, "CREATE INDEX IF NOT EXISTS idx_metadata_package_tag ON single_builds(package_name, platform)")
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dbExecute(con, "CREATE INDEX IF NOT EXISTS idx_metadata_package_tag ON single_builds(package_name, platform)")
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@ -46,8 +24,8 @@ store_build_metadata <- function(
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package_name, "' AND tag = '", tag, "'"
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package_name, "' AND tag = '", tag, "'"
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))
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))
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if (nrow(existing_entries) >= 1) {
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if (nrow(existing_entries) >= 1 && !force) {
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cli::cli_alert_info("{.fun store_build_metadata}: Build metadata for {.field {package_name}} {.field {tag}} already exists.")
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cli::cli_alert_info("{.fun store_build_metadata}: Build metadata for {.field {.pkg package_name}} {.field {tag}} already exists.")
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} else {
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} else {
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cli::cli_alert_info("{.fun store_build_metadata}: Storing build metadata for {.field {package_name}} {.field {tag}}.")
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cli::cli_alert_info("{.fun store_build_metadata}: Storing build metadata for {.field {package_name}} {.field {tag}}.")
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# Create a data frame with the metadata
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# Create a data frame with the metadata
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@ -63,19 +41,10 @@ store_build_metadata <- function(
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dbWriteTable(con, "single_builds", metadata, append = TRUE)
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dbWriteTable(con, "single_builds", metadata, append = TRUE)
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}
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}
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# dbExecute(con, "COMMIT")
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# Close the SQLite connection
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# Close the SQLite connection
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dbDisconnect(con)
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dbDisconnect(con)
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# s3 <- paws.storage::s3(config = list(
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return(invisible(TRUE))
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# endpoint = "https://s3.eu-central-003.backblazeb2.com",
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# region = "eu-central-003"
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# ))
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# s3$put_object(
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# Bucket = "devxy-arm64-r-binaries-db", Key = "metadata.sqlite",
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# Body = "/tmp/metadata.sqlite"
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# )
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}
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}
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#' @importFrom DBI dbConnect dbGetQuery
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#' @importFrom DBI dbConnect dbGetQuery
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@ -10,10 +10,15 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
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local_build_root = "/root",
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local_build_root = "/root",
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local_clone_dir = "/tmp",
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local_clone_dir = "/tmp",
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platform = "redhat-9",
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platform = "redhat-9",
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install_system_dependencies = TRUE) {
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install_system_dependencies = TRUE,
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cli::cli_h2("Preparations")
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debug = FALSE,
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force = FALSE) {
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cli::cli_h2("Preparations ({.pkg {package_name}})")
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codename <- set_codename(codename)
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codename <- set_codename(codename)
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cli::cli_alert_warning("DEBUG: codename {codename}.")
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if (debug) {
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cli::cli_alert_warning("DEBUG: codename {codename}.")
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}
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if (is.null(r_version_minor)) {
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if (is.null(r_version_minor)) {
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r_version_minor <- sub("R version (\\d+\\.\\d+).*", "\\1", R.Version()$version.string)
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r_version_minor <- sub("R version (\\d+\\.\\d+).*", "\\1", R.Version()$version.string)
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@ -21,16 +26,21 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
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# create directory structure
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# create directory structure
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dir_out_bin <- set_bin_path(r_version_minor, build_for_minor, local_build_root, codename)
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dir_out_bin <- set_bin_path(r_version_minor, build_for_minor, local_build_root, codename)
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cli::cli_alert_warning("DEBUG: dir_out_bin {dir_out_bin}.")
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if (debug) {
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cli::cli_alert_warning("DEBUG: dir_out_bin {dir_out_bin}.")
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}
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dir_out_src <- sprintf("%s/src/contrib/Archive", local_build_root)
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dir_out_src <- sprintf("%s/src/contrib/Archive", local_build_root)
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cli::cli_alert_info("{.fun build_binary_package}: Creating bin dir {.path {dir_out_bin}}.")
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if (debug) {
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cli::cli_alert_info("{.fun build_binary_package}: Creating src dir {.path {dir_out_src}}.")
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cli::cli_alert_info("{.fun build_binary_package}: Creating bin dir {.path {dir_out_bin}}.")
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cli::cli_alert_info("{.fun build_binary_package}: Creating src dir {.path {dir_out_src}}.")
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}
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dir.create(sprintf("%s/Archive", dir_out_bin), sprintf("%s/Archive", dir_out_src),
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dir.create(sprintf("%s/Archive", dir_out_bin), sprintf("%s/Archive", dir_out_src),
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recursive = TRUE
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recursive = TRUE
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)
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)
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cli::cli_h2("Installing system dependencies")
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cli::cli_h2("Installing system dependencies ({.pkg {package_name}})")
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gert::git_config_global_set("advice.detachedHead", "false")
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gert::git_config_global_set("advice.detachedHead", "false")
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@ -42,6 +52,9 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
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)
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)
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# Retrieve all tags
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# Retrieve all tags
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all_tags <- gert::git_tag_list(repo = sprintf("%s/%s", tempdir(), "tmp1"))
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all_tags <- gert::git_tag_list(repo = sprintf("%s/%s", tempdir(), "tmp1"))
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# filter out tags that start with R- (= non-valid ones)
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all_tags <- all_tags[!grepl("R-", all_tags$name), ]
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unlink(sprintf("%s/%s", tempdir(), "tmp1"), force = TRUE, recursive = TRUE)
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unlink(sprintf("%s/%s", tempdir(), "tmp1"), force = TRUE, recursive = TRUE)
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tag <- all_tags$name
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tag <- all_tags$name
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package_name <- rep(package_name, length(tag))
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package_name <- rep(package_name, length(tag))
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@ -61,9 +74,9 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
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}
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}
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t1 <- Sys.time()
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t1 <- Sys.time()
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cli::cli_h2("Building")
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cli::cli_h2("Building ({.pkg {package_name[1]}})")
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cli::cli_alert_info("Building binaries for {.pkg {package_name[[1]]}} with tags {.strong {tag}}.")
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cli::cli_alert_info("Building binaries for {.pkg {package_name[[1]]}} with tags {.field {tag}}.")
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# Set up the progress handler
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# Set up the progress handler
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progressr::handlers(global = TRUE)
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progressr::handlers(global = TRUE)
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@ -93,17 +106,17 @@ build_binary_package <- function(package_name, tag = NULL, codename = NULL,
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total_build_time <- round(Sys.time() - t1, 2)
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total_build_time <- round(Sys.time() - t1, 2)
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cli::cli_alert_info("Execution time for {.pkg {package_name[[1]]}} ({length(tag)} tags): {.strong {total_build_time} {units(difftime(Sys.time(), t1))}}.")
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cli::cli_alert_info("Execution time for {.pkg {package_name[[1]]}} ({length(tag)} tags): {.strong {total_build_time} {units(difftime(Sys.time(), t1))}}.")
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cli::cli_h2("Uploading")
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cli::cli_h2("Uploading ({.pkg {package_name[1]}})")
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out <- progressr::with_progress({
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out <- progressr::with_progress({
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p <- progressr::progressor(along = tag)
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p <- progressr::progressor(along = tag)
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future_mapply(function(x, y) {
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future_mapply(function(x, y) {
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tryCatch(
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tryCatch(
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{
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{
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p()
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p()
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upload_single_binary_to_s3(package_name = x, tag = y, debug = F)
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upload_single_binary_to_s3(package_name = x, tag = y, force = force, build_for_minor = build_for_minor, debug = debug)
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},
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},
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error = function(e) {
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error = function(e) {
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message("Error in uploading package ", x, " with tag ", y, ": ")
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message(sprintf("Error in uploading package %s with tag %s: %s", x, y, e))
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}
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}
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)
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)
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}, package_name, tag, future.seed = TRUE)
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}, package_name, tag, future.seed = TRUE)
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@ -117,7 +130,7 @@ install_package_system_dependencies <- function(package_name,
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tag,
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tag,
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platform = "redhat-9",
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platform = "redhat-9",
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local_clone_dir) {
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local_clone_dir) {
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cli::cli_alert_info("{.fun install_package_system_dependencies}: Cloning package {.pkg {package_name[1]}} with tag {.strong {tag}}.")
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cli::cli_alert_info("{.fun install_package_system_dependencies}: Cloning package {.pkg {package_name[1]}} with tag {.field {tag}}.")
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local_clone_dir_single <- sprintf("%s/%s_%s", local_clone_dir, package_name[1], tail(tag, 1))
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local_clone_dir_single <- sprintf("%s/%s_%s", local_clone_dir, package_name[1], tail(tag, 1))
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@ -147,7 +160,7 @@ build_single_tag <- function(
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platform,
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platform,
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dir_out_bin,
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dir_out_bin,
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local_clone_dir) {
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local_clone_dir) {
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cli::cli_alert_info("{.fun build_single_tag}: 1. Cloning package {.pkg {package_name}} with tag {.strong {tag}}.")
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cli::cli_alert_info("{.fun build_single_tag}: 1. Cloning package {.pkg {package_name}} with tag {.field {tag}}.")
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local_clone_dir_single <- sprintf("%s/%s_%s", local_clone_dir, package_name, tag)
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local_clone_dir_single <- sprintf("%s/%s_%s", local_clone_dir, package_name, tag)
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@ -158,15 +171,15 @@ build_single_tag <- function(
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))
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))
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if (file.exists(sprintf("%s/%s_%s.tar.gz", dir_out_bin, package_name, tag))) {
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if (file.exists(sprintf("%s/%s_%s.tar.gz", dir_out_bin, package_name, tag))) {
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cli::cli_alert_info("{.fun build_single_tag}: 2. Tarball for package {.pkg {package_name}} with tag {.strong {tag}} already exists. Skipping build.")
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cli::cli_alert_info("{.fun build_single_tag}: 2. Tarball for package {.pkg {package_name}} with tag {.field {tag}} already exists. Skipping build.")
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} else {
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} else {
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cli::cli_alert_info("{.fun build_single_tag}: 2. Building package {.pkg {package_name}} with tag {.strong {tag}}.")
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cli::cli_alert_info("{.fun build_single_tag}: 2. Building package {.pkg {package_name}} with tag {.field {tag}}.")
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t1 <- Sys.time()
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t1 <- Sys.time()
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pkgbuild::build(
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dump <- pkgbuild::build(
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path = sprintf("%s", local_clone_dir_single),
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path = sprintf("%s", local_clone_dir_single),
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binary = TRUE, vignettes = FALSE,
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binary = TRUE, vignettes = FALSE,
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dest_path = dir_out_bin
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dest_path = dir_out_bin, quiet = TRUE
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)
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)
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if (!file.exists(sprintf("%s/%s_%s.tar.gz", dir_out_bin, package_name, tag))) {
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if (!file.exists(sprintf("%s/%s_%s.tar.gz", dir_out_bin, package_name, tag))) {
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@ -200,6 +213,5 @@ build_single_tag <- function(
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}
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}
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}
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}
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return(invisible(TRUE))
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return(invisible(TRUE))
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}
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}
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@ -9,7 +9,7 @@ set_codename <- function(codename) {
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codename <- system2("grep",
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codename <- system2("grep",
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args = c("'^VERSION_CODENAME=' /etc/os-release | cut -d'=' -f2 | tr -d '\"'"), stdout = TRUE
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args = c("'^VERSION_CODENAME=' /etc/os-release | cut -d'=' -f2 | tr -d '\"'"), stdout = TRUE
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)
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)
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} else if (grepl("rhel", dist_fam)) {
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} else if (grepl("rhel|fedora", dist_fam)) {
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platform_id <- system2("grep",
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platform_id <- system2("grep",
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args = c("'^PLATFORM_ID=' /etc/os-release | cut -d'=' -f2 | tr -d '\"'"), stdout = TRUE
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args = c("'^PLATFORM_ID=' /etc/os-release | cut -d'=' -f2 | tr -d '\"'"), stdout = TRUE
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)
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)
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@ -42,8 +42,6 @@ set_bin_path <- function(
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local_build_root, codename, r_version_minor
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local_build_root, codename, r_version_minor
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)
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)
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}
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}
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cli::cli_alert_warning("DEBUG: path {path}.")
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return(path)
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return(path)
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}
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}
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