devxy/build-cran-binaries
Watch
1
0
Fork
You've already forked build-cran-binaries
 0
Code Issues 10 Pull requests Releases Activity

only append Makevars to not overwrite alpine ones

Browse source
This commit is contained in:
Patrick Schratz 2024-09-05 11:54:09 +02:00
commit b7e0b4cb1a
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 1 additions and 1 deletions
Download patch file Download diff file Expand all files Collapse all files

2
.woodpecker/process_cran_updates.yaml
View file

@ -43,7 +43,7 @@ steps:
- rm -rf /mnt/cache/R-pkgs/00LOCK-arm64-r-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /opt/R/*/lib/R/library/RPostgres /mnt/cache/R-pkgs/00LOCK-RPostgres
- rm -rf /mnt/cache/R-pkgs/RPostgres /mnt/cache/pkgcache/R/pkgcache
- R -q -e 'options(Ncpus = 4, repos = structure(c(devxy = "https://cran.devxy.io/${ARCH}/${PKGS_ID}/latest", CRAN = "https://cloud.r-project.org"))); devtools::install(quiet = TRUE); packageVersion("bincraftR")'
- mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" > /root/.R/Makevars'
- mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" >> /root/.R/Makevars'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
# set additional repos: important as otherwise some packages cannot be resolved (e.g. INLA). Also: setting our own binary repos so we can make use of them for dep installation at some point
# options(future.globals.onReference = NULL): for some reason s3fs::file_delete() throws 'Error: Detected a non-exportable reference ('externalptr') in one of the globals ('FUN' of class 'function') used in the future expression' otherwise