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fix: bincraftr url for install
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This commit is contained in:
Patrick Schratz 2025-05-29 17:14:14 +02:00
commit b769276679
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 32 additions and 32 deletions
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12
docker/Containerfile-redhat-9
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@ -3,16 +3,16 @@ ARG RED_HAT_DEV_PW
RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_DEV_PW" && subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms
RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.noarch.rpm && dnf install -y epel-release
RUN dnf install -y -q gcc-c++ lapack-devel make git ca-certificates
RUN dnf install -y -q gcc-c++ lapack-devel make git ca-certificates
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN curl -s -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && \
tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure --enable-silent-rules && make 2>&1
tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure --enable-silent-rules && make 2>&1
FROM redhat/ubi9 AS final
# renovate datasource=docker depName=rocker/r-ver
# renovate datasource=docker depName=rocker/r-ver
ARG R_VERSION=4.4.3
ARG RED_HAT_DEV_PW
ENV PATH=/opt/R/${R_VERSION}/bin:$PATH
@ -35,7 +35,7 @@ RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.n
# libfftw3-dev: ravetools -> actually auto-detect but somehow doesn't work in container?
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel tk-devel automake readline-devel
### CUSTOM DEPENDENCIES
### CUSTOM DEPENDENCIES
# - Chromium should be auto-installed once pkgdepends merges the latest system-requirements rule changes
RUN dnf install -y chromium
@ -56,6 +56,6 @@ RUN bash -c 'echo -e "PKG_SYSREQS = TRUE\nPKG_SYSREQS_VERBOSE = TRUE\nPKG_SYSREQ
# these dirs will later be used by the CI with existing mounts
RUN mkdir -p /mnt/cache/packages /mnt/cache/pkgcache /mnt/cache/R-pkgs
RUN R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git", dependencies = TRUE)'
RUN R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraftr.git", dependencies = TRUE)'
CMD ["/bin/bash"]
CMD ["/bin/bash"]