From adfb2d4a8765c3c354157baf211bd7f1e8de3745 Mon Sep 17 00:00:00 2001 From: pat-s Date: Mon, 25 May 2026 22:42:09 +0200 Subject: [PATCH] refactor(ci): use multi-R-version images in weekly-rebuild-missing workflows Drop the R-version suffix from each image tag, add an explicit R_VERSION env var per file, and invoke R via /opt/R/${R_VERSION}/bin/R at every call site. --- .crow/weekly-rebuild-missing-alpine-322-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-alpine-322-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-alpine-323-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-alpine-323-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-10-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-10-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-8-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-8-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-9-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-redhat-9-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-ubuntu-2204-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-ubuntu-2204-arm64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-ubuntu-2404-amd64.yaml | 13 +++++++------ .crow/weekly-rebuild-missing-ubuntu-2404-arm64.yaml | 13 +++++++------ 14 files changed, 98 insertions(+), 84 deletions(-) diff --git a/.crow/weekly-rebuild-missing-alpine-322-amd64.yaml b/.crow/weekly-rebuild-missing-alpine-322-amd64.yaml index 86f0680..18843a9 100644 --- a/.crow/weekly-rebuild-missing-alpine-322-amd64.yaml +++ b/.crow/weekly-rebuild-missing-alpine-322-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-alpine:3.22-4.5 + image: reg.devxy.io/rpkgs/build-env-alpine:3.22 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: alpine-322 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-alpine-322-arm64.yaml b/.crow/weekly-rebuild-missing-alpine-322-arm64.yaml index c985d1e..6bd7a9b 100644 --- a/.crow/weekly-rebuild-missing-alpine-322-arm64.yaml +++ b/.crow/weekly-rebuild-missing-alpine-322-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-alpine:3.22-4.5 + image: reg.devxy.io/rpkgs/build-env-alpine:3.22 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: alpine-322 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-alpine-323-amd64.yaml b/.crow/weekly-rebuild-missing-alpine-323-amd64.yaml index 1b40307..a597143 100644 --- a/.crow/weekly-rebuild-missing-alpine-323-amd64.yaml +++ b/.crow/weekly-rebuild-missing-alpine-323-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-alpine:3.23-4.5 + image: reg.devxy.io/rpkgs/build-env-alpine:3.23 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: alpine-323 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-alpine-323-arm64.yaml b/.crow/weekly-rebuild-missing-alpine-323-arm64.yaml index b76b3c8..47a073a 100644 --- a/.crow/weekly-rebuild-missing-alpine-323-arm64.yaml +++ b/.crow/weekly-rebuild-missing-alpine-323-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-alpine:3.23-4.5 + image: reg.devxy.io/rpkgs/build-env-alpine:3.23 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: alpine-323 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-10-amd64.yaml b/.crow/weekly-rebuild-missing-redhat-10-amd64.yaml index cfe3d01..4335e7f 100644 --- a/.crow/weekly-rebuild-missing-redhat-10-amd64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-10-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:10-4.5.3 + image: reg.devxy.io/rpkgs/build-env-redhat:10 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-10 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-10-arm64.yaml b/.crow/weekly-rebuild-missing-redhat-10-arm64.yaml index 89d7c45..e0ee2ee 100644 --- a/.crow/weekly-rebuild-missing-redhat-10-arm64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-10-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:10-4.5.3 + image: reg.devxy.io/rpkgs/build-env-redhat:10 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.5.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-10 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-8-amd64.yaml b/.crow/weekly-rebuild-missing-redhat-8-amd64.yaml index 62d11b3..68bff14 100644 --- a/.crow/weekly-rebuild-missing-redhat-8-amd64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-8-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:8-4.4.3 + image: reg.devxy.io/rpkgs/build-env-redhat:8 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-8 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-8-arm64.yaml b/.crow/weekly-rebuild-missing-redhat-8-arm64.yaml index 2194fee..f7fe7e9 100644 --- a/.crow/weekly-rebuild-missing-redhat-8-arm64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-8-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:8-4.4.3 + image: reg.devxy.io/rpkgs/build-env-redhat:8 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-8 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-9-amd64.yaml b/.crow/weekly-rebuild-missing-redhat-9-amd64.yaml index 4c7f404..fbdfcc3 100644 --- a/.crow/weekly-rebuild-missing-redhat-9-amd64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-9-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:9-4.4.3 + image: reg.devxy.io/rpkgs/build-env-redhat:9 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-9 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-redhat-9-arm64.yaml b/.crow/weekly-rebuild-missing-redhat-9-arm64.yaml index 64cf358..92fd2fa 100644 --- a/.crow/weekly-rebuild-missing-redhat-9-arm64.yaml +++ b/.crow/weekly-rebuild-missing-redhat-9-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-redhat:9-4.4.3 + image: reg.devxy.io/rpkgs/build-env-redhat:9 pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: redhat-9 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-ubuntu-2204-amd64.yaml b/.crow/weekly-rebuild-missing-ubuntu-2204-amd64.yaml index 94cdc34..c7bc6f7 100644 --- a/.crow/weekly-rebuild-missing-ubuntu-2204-amd64.yaml +++ b/.crow/weekly-rebuild-missing-ubuntu-2204-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-ubuntu:jammy-4.4.3 + image: reg.devxy.io/rpkgs/build-env-ubuntu:jammy pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: ubuntu-2204 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-ubuntu-2204-arm64.yaml b/.crow/weekly-rebuild-missing-ubuntu-2204-arm64.yaml index c8305a6..5d958d5 100644 --- a/.crow/weekly-rebuild-missing-ubuntu-2204-arm64.yaml +++ b/.crow/weekly-rebuild-missing-ubuntu-2204-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-ubuntu:jammy-4.4.3 + image: reg.devxy.io/rpkgs/build-env-ubuntu:jammy pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: ubuntu-2204 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-ubuntu-2404-amd64.yaml b/.crow/weekly-rebuild-missing-ubuntu-2404-amd64.yaml index 7da31a0..b508b85 100644 --- a/.crow/weekly-rebuild-missing-ubuntu-2404-amd64.yaml +++ b/.crow/weekly-rebuild-missing-ubuntu-2404-amd64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-ubuntu:noble-4.4.3 + image: reg.devxy.io/rpkgs/build-env-ubuntu:noble pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: ubuntu-2404 ARCH: amd64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: diff --git a/.crow/weekly-rebuild-missing-ubuntu-2404-arm64.yaml b/.crow/weekly-rebuild-missing-ubuntu-2404-arm64.yaml index 5bd25c7..063fa3c 100644 --- a/.crow/weekly-rebuild-missing-ubuntu-2404-arm64.yaml +++ b/.crow/weekly-rebuild-missing-ubuntu-2404-arm64.yaml @@ -10,7 +10,7 @@ labels: steps: - name: 'Rebuild missing binaries' - image: reg.devxy.io/rpkgs/build-env-ubuntu:noble-4.4.3 + image: reg.devxy.io/rpkgs/build-env-ubuntu:noble pull: true environment: RED_HAT_DEV_PW: @@ -30,6 +30,7 @@ steps: GIT_USER: pat-s R_PKG_CACHE_DIR: /mnt/cache/pkgcache R_LIBS_USER: /mnt/cache/R-pkgs + R_VERSION: 4.4.3 CCACHE_DIR: /mnt/cache/ccache PLATFORM: ubuntu-2404 ARCH: arm64 @@ -38,12 +39,12 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - rm -rf /mnt/cache/R-pkgs/00LOCK-* - - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' - - R -q -e 'packageVersion("bincraft")' + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - /opt/R/${R_VERSION}/bin/R -q -e 'packageVersion("bincraft")' - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run); XVFB_ARGS=""; if command -v xwfb-run >/dev/null 2>&1; then dnf install -y -q weston 2>/dev/null; XVFB_ARGS="-c weston"; fi - - R -q -e 'pak::pak("httr2")' - - R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' - - $XVFB $XVFB_ARGS -- R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 + - /opt/R/${R_VERSION}/bin/R -q -e 'pak::pak("httr2")' + - /opt/R/${R_VERSION}/bin/R -q -e 'source("local/fetch-rebuild-packages-from-issue.R")' + - $XVFB $XVFB_ARGS -- /opt/R/${R_VERSION}/bin/R -q -e "sink(stdout(), type = 'message'); options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pkgs <- readLines('/tmp/rebuild_pkgs.txt'); if (length(pkgs) == 0) { cat('Nothing to rebuild\n'); q('no') }; excluded <- jsonlite::fromJSON('local/excluded-packages.json')[['package']]; pkgs <- setdiff(pkgs, excluded); cat(sprintf('Rebuilding %d packages\n', length(pkgs))); n <- length(pkgs); for (i in seq_along(pkgs)) { x <- pkgs[i]; cat(sprintf('[%d/%d] %s\n', i, n, x)); tryCatch(bincraft::build_binary_package(x, tag_limit = 1L, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE), error = function(e) cat(sprintf('ERROR building %s - %s\n', x, conditionMessage(e)))) }" 2>&1 backend_options: kubernetes: resources: