diff --git a/.crow/process-updates-redhat-10-amd64.yaml b/.crow/process-updates-redhat-10-amd64.yaml new file mode 100644 index 0000000..7744828 --- /dev/null +++ b/.crow/process-updates-redhat-10-amd64.yaml @@ -0,0 +1,77 @@ +when: + - event: [cron] + cron: process-cran-updates-redhat-10-amd64 + - event: manual + evaluate: 'process_cran_updates == "all"' + - event: manual + evaluate: 'process_cran_updates == "redhat-10-amd64"' + +skip_clone: true + +labels: + agent: artemis + +steps: + - name: 'Processing Updates' + image: reg.devxy.io/rpkgs/build-env-redhat:10-4.5.3 + pull: true + environment: + RED_HAT_DEV_PW: + from_secret: RED_HAT_DEV_PW + B2_S3_ACCESS_KEY: + from_secret: B2_S3_ACCESS_KEY + B2_S3_SECRET_KEY: + from_secret: B2_S3_SECRET_KEY + PGPASS: + from_secret: PGPASS + REPO_RO_TOKEN: + from_secret: REPO_RO_TOKEN + GITHUB_PAT: + from_secret: GITHUB_PAT + # normal env vars + GIT_USER: pat-s + NTFY_SERVER: + from_secret: NTFY_SERVER + NTFY_TOPIC: + from_secret: NTFY_TOPIC + NTFY_AUTH: TRUE + NTFY_PASSWORD: + from_secret: ntfy_token + # set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves + R_PKG_CACHE_DIR: /mnt/cache/pkgcache + R_LIBS_USER: /mnt/cache/R-pkgs + CCACHE_DIR: /mnt/cache/ccache + PLATFORM: redhat-10 + ARCH: amd64 + NCPUS: 2 + MEMORY: 18Gi + STRATEGY: sequential + INTERVAL: lubridate::interval(lubridate::today() - 6, lubridate::today() - 3) + # volumes: + # - amd64-binaries-r-dep-cache-redhat-10:/mnt/cache + commands: + - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . + - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraft /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres /mnt/cache/R-pkgs/bincraft + - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - R -q -e 'packageVersion("bincraft")' + - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages + # options(future.globals.onReference = NULL): for some reason s3fs::file_delete() throws 'Error: Detected a non-exportable reference ('externalptr') in one of the globals ('FUN' of class 'function') used in the future expression' otherwise + - xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = 'error', repos = structure(c(getOption('repos'),INLA='https://inla.r-inla-download.org/R/stable'))); progressr::handlers('cli'); progressr::handlers(global = TRUE); options(future.globals.onReference = NULL); bincraft::process_cran_updates(interval = $INTERVAL, platform = 'redhat-10', process_updated = TRUE, process_new = TRUE, process_removed = TRUE, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE)" + - R -q -e 'library(bincraft); upload_package_index(codename = "rhel9", s3_endpoint = "https://s3.eu-central-003.backblazeb2.com", s3_region = "eu-central-003", s3_bucket = "devxy-rpkgs-binaries", s3_access_key_id = Sys.getenv("B2_S3_ACCESS_KEY"), s3_secret_access_key = Sys.getenv("B2_S3_SECRET_KEY"))' + backend_options: + kubernetes: + resources: + requests: + memory: 5Gi + cpu: 3000m + limits: + memory: 18Gi + cpu: 3000m + nodeSelector: + kubernetes.io/arch: amd64 + node.kubernetes.io/instance-type: AX42 + tolerations: + - key: 'CI' + operator: 'Equal' + value: 'true' + effect: 'NoSchedule' diff --git a/.crow/process-updates-redhat-10-arm64.yaml b/.crow/process-updates-redhat-10-arm64.yaml new file mode 100644 index 0000000..fd64291 --- /dev/null +++ b/.crow/process-updates-redhat-10-arm64.yaml @@ -0,0 +1,58 @@ +when: + - event: [cron] + cron: process-cran-updates-redhat-10-arm64 + - event: manual + evaluate: 'process_cran_updates == "all"' + - event: manual + evaluate: 'process_cran_updates == "redhat-10-arm64"' + +skip_clone: true + +labels: + agent: gaia + +steps: + - name: 'Processing Updates' + image: reg.devxy.io/rpkgs/build-env-redhat:10-4.5.3 + pull: true + environment: + RED_HAT_DEV_PW: + from_secret: RED_HAT_DEV_PW + B2_S3_ACCESS_KEY: + from_secret: B2_S3_ACCESS_KEY + B2_S3_SECRET_KEY: + from_secret: B2_S3_SECRET_KEY + PGPASS: + from_secret: PGPASS + REPO_RO_TOKEN: + from_secret: REPO_RO_TOKEN + GITHUB_PAT: + from_secret: GITHUB_PAT + # normal env vars + GIT_USER: pat-s + NTFY_SERVER: + from_secret: NTFY_SERVER + NTFY_TOPIC: + from_secret: NTFY_TOPIC + NTFY_AUTH: TRUE + NTFY_PASSWORD: + from_secret: ntfy_token + # set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves + R_PKG_CACHE_DIR: /mnt/cache/pkgcache + R_LIBS_USER: /mnt/cache/R-pkgs + CCACHE_DIR: /mnt/cache/ccache + PLATFORM: redhat-10 + ARCH: arm64 + NCPUS: 2 + INTERVAL: lubridate::interval(lubridate::today() - 6, lubridate::today() - 3) + # volumes: + # - arm64-binaries-r-dep-cache-redhat-10:/mnt/cache + commands: + - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . + - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraft /mnt/cache/R-pkgs/00LOCK-pak /mnt/cache/pkgcache/R/pkgcache /mnt/cache/pkgcache/R/pkgcache /mnt/cache/R-pkgs/pkgcache /mnt/cache/R-pkgs/00LOCK-pak/mnt/cache/R-pkgs/00LOCK-RPostgres /mnt/cache/R-pkgs/bincraft + - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - R -q -e 'packageVersion("bincraft")' + - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages + # options(future.globals.onReference = NULL): for some reason s3fs::file_delete() throws 'Error: Detected a non-exportable reference ('externalptr') in one of the globals ('FUN' of class 'function') used in the future expression' otherwise + - xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = 4, future.globals.onReference = 'error', repos = structure(c(getOption('repos'),INLA='https://inla.r-inla-download.org/R/stable'))); progressr::handlers('cli'); progressr::handlers(global = TRUE); options(future.globals.onReference = NULL); bincraft::process_cran_updates(interval = $INTERVAL, platform = 'redhat-10', process_updated = TRUE, process_new = TRUE, process_removed = TRUE, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE)" + - R -q -e 'library(bincraft); upload_package_index(codename = "rhel9", s3_endpoint = "https://s3.eu-central-003.backblazeb2.com", s3_region = "eu-central-003", s3_bucket = "devxy-rpkgs-binaries", s3_access_key_id = Sys.getenv("B2_S3_ACCESS_KEY"), s3_secret_access_key = Sys.getenv("B2_S3_SECRET_KEY"))' diff --git a/.crow/update-package-index-redhat-10-amd64.yaml b/.crow/update-package-index-redhat-10-amd64.yaml new file mode 100644 index 0000000..b3f7056 --- /dev/null +++ b/.crow/update-package-index-redhat-10-amd64.yaml @@ -0,0 +1,81 @@ +when: + - event: [cron] + cron: update-package-index-redhat-10-amd64 + - event: [cron] + cron: update-package-index + - event: manual + evaluate: 'update_package_index == "redhat-10-amd64"' + +skip_clone: true + +depends_on: + - update-package-index-redhat-8-arm64 + +steps: + - name: Upload PACKAGES files + image: reg.devxy.io/rpkgs/build-env-ubuntu:noble-4.5 + pull: true + environment: + RED_HAT_DEV_PW: + from_secret: RED_HAT_DEV_PW + B2_S3_ACCESS_KEY: + from_secret: B2_S3_ACCESS_KEY + B2_S3_SECRET_KEY: + from_secret: B2_S3_SECRET_KEY + PGPASS: + from_secret: PGPASS + REPO_RO_TOKEN: + from_secret: REPO_RO_TOKEN + GITHUB_PAT: + from_secret: GITHUB_PAT + # normal env vars + GIT_USER: pat-s + NTFY_SERVER: + from_secret: NTFY_SERVER + NTFY_TOPIC: + from_secret: NTFY_TOPIC + NTFY_AUTH: TRUE + NTFY_PASSWORD: + from_secret: ntfy_token + # set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves + R_PKG_CACHE_DIR: /mnt/cache/pkgcache + R_LIBS_USER: /mnt/cache/R-pkgs + commands: + - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . + - rm -rf /mnt/cache/packages/* + - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - R -q -e 'pak::pak("pat-s/cranlike@s3")' + - R -q -e 'pak::pak("pat-s/desc@description-from-remote")' + - R -q -e 'packageVersion("bincraft")' + - cd /mnt/cache/packages + - R -q -e 'options(crayon.enabled = TRUE); library(bincraft); future::plan("multisession", workers = 4); library(progressr); handlers(global = TRUE); handlers("progress"); upload_package_index(codename = "rhel10", s3_endpoint = "https://s3.eu-central-003.backblazeb2.com", s3_region = "eu-central-003", s3_bucket = "devxy-rpkgs-binaries", s3_access_key_id = Sys.getenv("B2_S3_ACCESS_KEY"), s3_secret_access_key = Sys.getenv("B2_S3_SECRET_KEY"))' + backend_options: + kubernetes: + resources: + requests: + memory: 2600Mi + cpu: 2000m + limits: + memory: 2600Mi + cpu: 8000m + nodeSelector: + kubernetes.io/arch: 'amd64' + tolerations: + - key: 'CI' + operator: 'Equal' + value: 'true' + effect: 'NoSchedule' + + - name: Purge CDN cache + image: reg.devxy.io/docker.io/library/alpine:3.23 + environment: + BUNNYNET_API_KEY: + from_secret: BUNNYNET_API_KEY + SUBDOMAIN1: 'cran.devxy.io' + SUBDOMAIN2: 'cran.allianceswisspass.devxy.io' + SUBDOMAIN3: 'cran.rpkgs.com' + OS_ID: rhel10 + ARCH: amd64 + commands: + - apk add --no-cache -q bash curl + - bash scripts/purge_cdn_cache.sh "$BUNNYNET_API_KEY" "$ARCH" "$OS_ID" "$SUBDOMAIN1" "$SUBDOMAIN2" "$SUBDOMAIN3" diff --git a/.crow/update-package-index-redhat-10-arm64.yaml b/.crow/update-package-index-redhat-10-arm64.yaml new file mode 100644 index 0000000..22d6b2a --- /dev/null +++ b/.crow/update-package-index-redhat-10-arm64.yaml @@ -0,0 +1,81 @@ +when: + - event: [cron] + cron: update-package-index-redhat-10-arm64 + - event: [cron] + cron: update-package-index + - event: manual + evaluate: 'update_package_index == "redhat-10-arm64"' + +skip_clone: true + +depends_on: + - update-package-index-redhat-10-amd64 + +steps: + - name: Upload PACKAGES files + image: reg.devxy.io/rpkgs/build-env-ubuntu:noble-4.4 + pull: true + environment: + RED_HAT_DEV_PW: + from_secret: RED_HAT_DEV_PW + B2_S3_ACCESS_KEY: + from_secret: B2_S3_ACCESS_KEY + B2_S3_SECRET_KEY: + from_secret: B2_S3_SECRET_KEY + PGPASS: + from_secret: PGPASS + REPO_RO_TOKEN: + from_secret: REPO_RO_TOKEN + GITHUB_PAT: + from_secret: GITHUB_PAT + # normal env vars + GIT_USER: pat-s + NTFY_SERVER: + from_secret: NTFY_SERVER + NTFY_TOPIC: + from_secret: NTFY_TOPIC + NTFY_AUTH: TRUE + NTFY_PASSWORD: + from_secret: ntfy_token + # set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves + R_PKG_CACHE_DIR: /mnt/cache/pkgcache + R_LIBS_USER: /mnt/cache/R-pkgs + commands: + - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . + - rm -rf /mnt/cache/packages/* + - R -q -e 'pak::pak("git::https://codefloe.com/rpkgs/bincraft.git")' + - R -q -e 'pak::pak("pat-s/cranlike@s3")' + - R -q -e 'pak::pak("pat-s/desc@description-from-remote")' + - R -q -e 'packageVersion("bincraft")' + - cd /mnt/cache/packages + - R -q -e 'options(crayon.enabled = TRUE); library(bincraft); future::plan("multisession", workers = 4); library(progressr); handlers(global = TRUE); handlers("progress"); upload_package_index(codename = "rhel10", s3_endpoint = "https://s3.eu-central-003.backblazeb2.com", s3_region = "eu-central-003", s3_bucket = "devxy-rpkgs-binaries", s3_access_key_id = Sys.getenv("B2_S3_ACCESS_KEY"), s3_secret_access_key = Sys.getenv("B2_S3_SECRET_KEY"))' + backend_options: + kubernetes: + resources: + requests: + memory: 2600Mi + cpu: 2000m + limits: + memory: 2600Mi + cpu: 8000m + nodeSelector: + kubernetes.io/arch: 'arm64' + tolerations: + - key: 'CI' + operator: 'Equal' + value: 'true' + effect: 'NoSchedule' + + - name: Purge CDN cache + image: reg.devxy.io/docker.io/library/alpine:3.23 + environment: + BUNNYNET_API_KEY: + from_secret: BUNNYNET_API_KEY + SUBDOMAIN1: 'cran.devxy.io' + SUBDOMAIN2: 'cran.allianceswisspass.devxy.io' + SUBDOMAIN3: 'cran.rpkgs.com' + OS_ID: rhel10 + ARCH: arm64 + commands: + - apk add --no-cache -q bash curl + - bash scripts/purge_cdn_cache.sh "$BUNNYNET_API_KEY" "$ARCH" "$OS_ID" "$SUBDOMAIN1" "$SUBDOMAIN2" "$SUBDOMAIN3"