feat(ci): OS/OS_VERSION manual dropdowns + restore lost crow fix (#97)

## Summary

Two changes:

1. **`OS`/`OS_VERSION` manual-run dropdowns** — give these form variables explicit `options:` lists (like `target_arch` and `R_VERSION`), so the manual-run form shows dropdowns instead of free-text, in both `build-all-versions.yaml` and `build-all-versions-install-deps.yaml`. Crow form variables are independent (no cascading), so the operator still has to pick a coherent `OS` + `OS_VERSION` combination (e.g. `redhat` + `9`, not `alpine` + `jammy`).

2. **Repairs `main`** — the crow fix from PR #96 (`bc2f6f1`) was lost when that PR was squashed (only the first commit was captured). As a result `main` currently carries the `OS: ${OS}` env vars that break Crow parsing (`unable to parse variable name`) and the unfixed `build-all.R`. This PR re-applies that fix: drop the env additions and derive `platform`/`arch` inside `build-all.R` from the container (bincraft codename → platform mapping + `Sys.info()` arch).

## Notes
- `OS_VERSION` options are quoted strings so tags like `8`/`9`/`10` aren't parsed as integers.
- Validated: both YAMLs parse, `build-all.R` parses.

Reviewed-on: #97
This commit is contained in:
Patrick Schratz 2026-06-18 11:39:11 +00:00 committed by Patrick Schratz
commit 83c761b736
3 changed files with 51 additions and 13 deletions

View file

@ -10,10 +10,21 @@ variables:
- arm64
default: amd64
OS:
description: "Base OS image name (e.g. alpine, redhat, ubuntu)."
description: "Base OS image name."
options:
- alpine
- redhat
- ubuntu
default: alpine
OS_VERSION:
description: "OS version / image tag (e.g. 3.24, 9, jammy, noble)."
description: "OS image tag. Must match OS (alpine: 3.24; redhat: 8/9/10; ubuntu: jammy/noble)."
options:
- "3.24"
- "8"
- "9"
- "10"
- "jammy"
- "noble"
default: "3.24"
R_VERSION:
description: "Primary R version under /opt/R."

View file

@ -11,10 +11,21 @@ variables:
- arm64
default: amd64
OS:
description: "Base OS image name (e.g. alpine, redhat, ubuntu)."
description: "Base OS image name."
options:
- alpine
- redhat
- ubuntu
default: alpine
OS_VERSION:
description: "OS version / image tag (e.g. 3.24, 9, jammy, noble)."
description: "OS image tag. Must match OS (alpine: 3.24; redhat: 8/9/10; ubuntu: jammy/noble)."
options:
- "3.24"
- "8"
- "9"
- "10"
- "jammy"
- "noble"
default: "3.24"
R_VERSION:
description: "Primary R version under /opt/R."
@ -90,13 +101,6 @@ steps:
from_secret: GITHUB_PAT
# normal env vars
GIT_USER: pat-s
# Export the platform selectors as runtime env vars. They are otherwise
# only available for ${...} interpolation (image/volume), so build-all.R's
# `Sys.getenv("OS")/("OS_VERSION")/("ARCH")` would be empty and its
# already-built dedup query would match platform "-" and skip nothing.
OS: ${OS}
OS_VERSION: ${OS_VERSION}
ARCH: ${ARCH}
# set the location of the 'pkgcache' cache dir which persists the R package dependencies needed to install the packages themselves
R_PKG_CACHE_DIR: ${R_PKG_CACHE_DIR}
R_LIBS_USER: /mnt/cache/R-pkgs

View file

@ -68,8 +68,31 @@ chunk <- chunk[!chunk$Package %in% exclude, ]
# pkgs_to_build.rds is a static snapshot from the install-deps step, so on a
# restart it still lists everything an interrupted run already produced. The
# metadata DB reflects that progress, so we re-derive the remaining set here.
platform <- paste(Sys.getenv("OS"), gsub("[.]", "", Sys.getenv("OS_VERSION")), sep = "-")
arch <- Sys.getenv("ARCH")
# Derive platform + arch from the running container, mirroring the codename ->
# platform mapping bincraft uses internally. The OS/OS_VERSION selectors are
# workflow-level CI variables that are not injected into the container
# environment, so Sys.getenv() would return "" and this pre-filter would query
# platform "-" and skip nothing.
codename <- bincraft::set_codename(NULL)
platform <- switch(
codename,
jammy = "ubuntu-2204",
noble = "ubuntu-2404",
resolute = "ubuntu-2604",
rhel10 = "redhat-10",
rhel9 = "redhat-9",
rhel8 = "redhat-8",
alpine320 = "alpine-320",
alpine321 = "alpine-321",
alpine322 = "alpine-322",
alpine323 = "alpine-323",
alpine324 = "alpine-324",
alpine325 = "alpine-325",
alpine326 = "alpine-326",
NA_character_
)
local_machine <- Sys.info()[["machine"]]
arch <- if (grepl("arm64|aarch64", local_machine)) "arm64" else "amd64"
con <- DBI::dbConnect(
RPostgres::Postgres(),
dbname = "build_metadata",