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add fftw to all images

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This commit is contained in:
Patrick Schratz 2024-09-15 23:32:59 +02:00
commit 833fa910d4
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 24 additions and 10 deletions
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7
docker/Dockerfile-redhat-8
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@ -18,7 +18,9 @@ RUN subscription-manager register --username mail@devxy.io --password "$RED_HAT_
RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.noarch.rpm && dnf install -y epel-release
# xvfb: for graphical pkgs requiring tcl, like gWidgets2tcltk
# ImageMagick-c++-devel ImageMagick-devel: boths are not auto-installed via pak sysreqs
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config
# mecab-devel: RcppMeCab -> no autodetection yet
# libfftw3-dev: ravetools -> actually auto-detect but somehow doesn't work in container?
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
@ -32,7 +34,8 @@ RUN R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/
### Makevars
# dbarts: CFLAGS += -flax-vector-conversions (https://github.com/vdorie/dbarts/issues/66)
RUN mkdir -p /root/.R && bash -c 'echo -e "CXX_STD = CXX14\nCFLAGS += -flax-vector-conversions\nCC=ccache gcc\nCPP=gcc -E\nCXXCPP=gcc -e\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" >> /root/.R/Makevars'
# can't set ccache for gfortran because of https://gitlab.com/roigrp/solver/highs/-/issues/4
RUN mkdir -p /root/.R && bash -c 'echo -e "CXX_STD = CXX14\nCFLAGS += -flax-vector-conversions\nCC=ccache gcc\nCPP=gcc -E\nCXXCPP=gcc -e\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=gfortran\nFC=gfortran" >> /root/.R/Makevars'
# R repos
RUN bash -c 'echo -e "options(crayon.enabled = TRUE, Ncpus = ${NCPUS}, future.globals.onReference = NULL, repos = structure(c(CRAN = \"https://cloud.r-project.org\", INLA = \"https://inla.r-inla-download.org/R/stable\")))" > /root/.Rprofile'