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dynamic dep installs in images

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This commit is contained in:
Patrick Schratz 2024-12-13 16:19:11 +01:00
commit 7ceb06323e
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 10 additions and 28 deletions
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5
docker/Containerfile-alpine-320
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@ -65,12 +65,9 @@ RUN R -q -e 'install.packages("pak", repos = sprintf("https://r-lib.github.io/p/
# these dirs will later be used by the CI with existing mounts
RUN mkdir -p /mnt/cache/packages /mnt/cache/pkgcache /mnt/cache/R-pkgs
# FIXME: switch to pak after https://github.com/r-lib/pak/issues/628
# deps from pak::pkg_deps(".")$package
RUN R -q -e 'pak::pak(c("DBI", "R6", "RPostgres", "Rcpp", "askpass", "base64enc", "bit64", "bit", "blob", "callr", "cli", "credentials", "curl", "data.table", "desc", "digest", "dplyr", "fansi", "fs", "future.apply", "future", "generics", "gert", "globals", "glue", "hms", "httr", "jsonlite", "lgr", "lifecycle", "listenv", "lubridate", "magrittr", "mime", "openssl", "parallelly", "paws.common", "paws.storage", "pillar", "pkgbuild", "pkgconfig", "processx", "progressr", "ps", "purrr", "rlang", "rstudioapi", "s3fs", "stringi", "stringr", "sys", "tibble", "tidyselect", "timechange", "utf8", "vctrs", "withr", "xml2", "zip", "codetools", "cranlike", "RSQLite", "cachem", "crayon", "debugme", "fastmap", "memoise", "progress", "future.callr", "dbplyr"))'
# encoding -> https://github.com/r-hub/r-minimal/blob/fa9c117313e05860a0d20b113e5f794c51be8b8c/Dockerfile#L84
RUN sed -i 's/,//g' /opt/R/${R_VERSION}/lib/R/library/utils/iconvlist
RUN R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git")'
RUN R -q -e 'pak::pak("git::https://gitlab.com/devxy/r-package-binaries/bincraftr.git", dependencies = TRUE)'
CMD ["/bin/bash"]