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dont install jags twice

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This commit is contained in:
Patrick Schratz 2025-02-28 15:59:37 +01:00
commit 43b2cd2890
Signed by: pat-s
GPG key ID: 3C6318841EF78925
6 changed files with 0 additions and 18 deletions
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4
docker/Containerfile-alpine-320
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@ -28,10 +28,6 @@ COPY --link --from=jags /JAGS-4.3.2 /JAGS-4.3.2
RUN apk add -q --no-cache curl tar make lapack lapack-dev blas blas-dev gcc gfortran g++ htop git cmake tk-dev xvfb xvfb-run xorg-server xauth xinit xz libdeflate libdeflate-dev
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN curl -q -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure --enable-silent-rules && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN apk del lapack lapack-dev
# linux-headers: ps
# libxml2-dev: xml2

4
docker/Containerfile-alpine-321
View file

@ -28,10 +28,6 @@ COPY --link --from=jags /JAGS-4.3.2 /JAGS-4.3.2
RUN apk add -q --no-cache curl tar make lapack lapack-dev blas blas-dev gcc gfortran g++ htop git cmake tk-dev xvfb xvfb-run xorg-server xauth xinit xz libdeflate libdeflate-dev
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN curl -q -L -O https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.3.2.tar.gz && tar -xzf JAGS-4.3.2.tar.gz && cd JAGS-4.3.2 && ./configure --enable-silent-rules && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2.tar.gz JAGS-4.3.2 && cd ..
RUN apk del lapack lapack-dev
# linux-headers: ps
# libxml2-dev: xml2

3
docker/Containerfile-redhat-8
View file

@ -36,9 +36,6 @@ RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-8.n
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2_1.7-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel tk-devel automake readline-devel
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN cd /JAGS-4.3.2 && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2 && cd ..
# - Chromium should be auto-installed once pkgdepends merges the latest system-requirements rule changes
RUN dnf install -y chromium

3
docker/Containerfile-redhat-9
View file

@ -36,9 +36,6 @@ RUN dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.n
RUN dnf install -y -q make lapack-devel git gcc gcc-c++ fontconfig-devel fribidi-devel libjpeg-turbo-devel libtiff-devel postgresql-devel htop libgit2-devel libxml2-devel hiredis ccache cmake xorg-x11-server-Xvfb ImageMagick-c++-devel ImageMagick-devel xz pkg-config mecab-devel fftw-devel tk-devel automake readline-devel
### CUSTOM DEPENDENCIES
# These usually are not packaged in OS repositories and need to be installed from source
# - JAGS (needed for runjags which itself is again a dependency of many packages)
RUN cd /JAGS-4.3.2 && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2 && cd ..
# - Chromium should be auto-installed once pkgdepends merges the latest system-requirements rule changes
RUN dnf install -y chromium

2
docker/Containerfile-ubuntu-2204
View file

@ -28,8 +28,6 @@ COPY --link --from=jags /JAGS-4.3.2 /JAGS-4.3.2
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop libgit2-dev git libpq-dev libxml2-dev libgit2-dev cmake xvfb libcurl4-openssl-dev xz-utils tcl tk tk-dev tk-table pkg-config libmecab-dev libfftw3-dev automake
### CUSTOM DEPENDENCIES
# JAGS
RUN cd /JAGS-4.3.2 && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2 && cd ..
# - Chromium should be auto-installed once pkgdepends merges the latest system-requirements rule changes
RUN apt-get install -y software-properties-common && \
add-apt-repository -y ppa:xtradeb/apps && \

2
docker/Containerfile-ubuntu-2404
View file

@ -28,8 +28,6 @@ COPY --link --from=jags /JAGS-4.3.2 /JAGS-4.3.2
RUN apt update && apt install -y --no-install-recommends gdebi-core g++ gfortran libbz2-dev libblas-dev libicu-dev liblapack-dev liblzma-dev libpaper-utils libpcre2-dev libtcl8.6 libtk8.6 libxt6 unzip zip zlib1g-dev libpcre3-dev libopenblas-dev curl ca-certificates make ccache htop libgit2-dev git libpq-dev libxml2-dev libgit2-dev cmake xvfb libcurl4-openssl-dev xz-utils tcl tk tk-dev tk-table pkg-config libmecab-dev libfftw3-dev automake
### CUSTOM DEPENDENCIES
# JAGS
RUN cd /JAGS-4.3.2 && make 2>&1 && make install 2>&1 >/dev/null && rm -rf JAGS-4.3.2 && cd ..
# - Chromium should be auto-installed once pkgdepends merges the latest system-requirements rule changes
RUN apt-get install -y software-properties-common && \
add-apt-repository -y ppa:xtradeb/apps && \