From 386deb5dfbf390c0fcd6d72872c8cd99f98bedfe Mon Sep 17 00:00:00 2001 From: pat-s Date: Mon, 25 May 2026 22:58:57 +0200 Subject: [PATCH] refactor(ci): use multi-R-version image in build-r-minor-sensitive-packages Drop -${r_version} from the docker.io/devxygmbh tag and invoke R via the explicit /opt/R/${r_version}/bin/R path (including R CMD INSTALL). Bumps the matrix r_version values from 4.5/4.4 to the full-patch 4.5.3/4.4.3, matching the rest of the refactor's 'always full patch' rule. --- .crow/build-r-minor-sensitive-packages.yaml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/.crow/build-r-minor-sensitive-packages.yaml b/.crow/build-r-minor-sensitive-packages.yaml index 6e9d10c..e4eea47 100644 --- a/.crow/build-r-minor-sensitive-packages.yaml +++ b/.crow/build-r-minor-sensitive-packages.yaml @@ -17,16 +17,16 @@ matrix: include: - os: alpine os_version: 3.21 - r_version: 4.5 + r_version: 4.5.3 - os: alpine os_version: 3.21 - r_version: 4.4 + r_version: 4.4.3 # - os: alpine # os_version: 3.21 # r_version: 4.3 steps: - name: 'Build R-minor-sensitive binaries' - image: "docker.io/devxygmbh/rpkgs-build-env-${os}:${os_version}-${r_version}" + image: "docker.io/devxygmbh/rpkgs-build-env-${os}:${os_version}" pull: true environment: RED_HAT_DEV_PW: @@ -60,10 +60,10 @@ steps: - git clone -q https://pat-s:$$REPO_RO_TOKEN@git.devxy.io/devxy/build-cran-binaries.git . - rm -rf /mnt/cache/R-pkgs/00LOCK-* - mkdir -p /tmp/R-libs - - git clone -q https://codefloe.com/rpkgs/bincraft.git /tmp/bincraft && R CMD INSTALL --library=/tmp/R-libs /tmp/bincraft && R -q -e 'packageVersion("bincraft")' + - git clone -q https://codefloe.com/rpkgs/bincraft.git /tmp/bincraft && /opt/R/${r_version}/bin/R CMD INSTALL --library=/tmp/R-libs /tmp/bincraft && /opt/R/${r_version}/bin/R -q -e 'packageVersion("bincraft")' - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - XVFB=$(command -v xwfb-run 2>/dev/null || command -v xvfb-run) - - $XVFB -- R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pak::sysreqs_db_update(); pkgs = bincraft::get_r_minor_sensitive_packages(r_minor_packages_issue_url = 'https://git.devxy.io/api/v1/repos/devxy/build-cran-binaries/issues/29'); foo = lapply(pkgs, function(x) bincraft::build_binary_package(x, is_debug = FALSE, is_r_minor_sensitive = TRUE, force = FALSE, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE))" 2>&1 + - $XVFB -- /opt/R/${r_version}/bin/R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL); pak::sysreqs_db_update(); pkgs = bincraft::get_r_minor_sensitive_packages(r_minor_packages_issue_url = 'https://git.devxy.io/api/v1/repos/devxy/build-cran-binaries/issues/29'); foo = lapply(pkgs, function(x) bincraft::build_binary_package(x, is_debug = FALSE, is_r_minor_sensitive = TRUE, force = FALSE, s3_endpoint = 'https://s3.eu-central-003.backblazeb2.com', s3_region = 'eu-central-003', s3_bucket = 'devxy-rpkgs-binaries', s3_access_key_id = Sys.getenv('B2_S3_ACCESS_KEY'), s3_secret_access_key = Sys.getenv('B2_S3_SECRET_KEY'), metadata_db_host = 'r-binaries.devxy.io', metadata_db_name = 'build_metadata', metadata_db_table = 'single_builds', metadata_db_user = 'rpkgs', metadata_db_password = Sys.getenv('PGPASS'), metadata_db_sslmode = 'require', metadata_db_port = 15432, archive = TRUE, upload = TRUE, store_build_metadata = TRUE))" 2>&1 backend_options: kubernetes: resources: