devxy/build-cran-binaries
Watch
1
0
Fork
You've already forked build-cran-binaries
 0
Code Issues 10 Pull requests Releases Activity

build

Browse source
This commit is contained in:
Patrick Schratz 2024-09-23 12:05:56 +02:00
commit 25c493d5b9
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 59 additions and 63 deletions
Download patch file Download diff file Expand all files Collapse all files

37
.woodpecker/build.yaml
View file

@ -8,26 +8,26 @@ depends_on:
matrix:
include:
- PLATFORM: redhat-9
BLOCK: 1135:length(pkgs)
ARCH: arm64
NCPUS: 2
MEMORY: 29Gi
STRATEGY: multisession
- PLATFORM: redhat-8
BLOCK: 1098:length(pkgs)
ARCH: arm64
NCPUS: 2
MEMORY: 29Gi
STRATEGY: multisession
# - PLATFORM: redhat-9
# BLOCK: 1135:length(pkgs)
# ARCH: arm64
# NCPUS: 2
# MEMORY: 29Gi
# STRATEGY: multisession
# - PLATFORM: redhat-8
# BLOCK: 1098:length(pkgs)
# ARCH: arm64
# NCPUS: 2
# MEMORY: 29Gi
# STRATEGY: multisession
- PLATFORM: ubuntu-2404
BLOCK: 1226:length(pkgs)
BLOCK: 1248:length(pkgs)
ARCH: arm64
NCPUS: 2
MEMORY: 29Gi
STRATEGY: multisession
- PLATFORM: ubuntu-2204
BLOCK: 1302:length(pkgs)
BLOCK: 1325:length(pkgs)
ARCH: arm64
NCPUS: 2
MEMORY: 29Gi
@ -52,7 +52,7 @@ matrix:
MEMORY: 29Gi
STRATEGY: multisession
- PLATFORM: ubuntu-2404
BLOCK: 1436:length(pkgs)
BLOCK: 1481:length(pkgs)
ARCH: amd64
NCPUS: 2
MEMORY: 29Gi
@ -99,7 +99,8 @@ steps:
### Check
# - Rsymphony/ROI.plugin.symphony/adea/PortfolioAnalytics -> can't install/link external SYMPHONY lib (only on RHEL, as for others syslib exists)
# - Rglpk
- R -q -e 'options(crayon.enabled = TRUE, Ncpus = ${NCPUS}, future.globals.onReference = NULL); pkgs = tools::CRAN_package_db()[[1]]; pkgs = setdiff(pkgs[${BLOCK}], c("Rsymphony", "PortfolioAnalytics", "ROI.plugin.symphony", "adea", "RInno", "skedastic", "RPushbullet", "SimNPH", "SimDesign","simCAT", "SIAmodules", "shinytest2", "shinyIRT", "ShinyItemAnalysis", "shiny.benchmark", "scDIFtest", "RSP", "ROracle", "ROI.plugin.qpoases", "ROI.plugin.cplex", "RmecabKo", "rmarchingcubes", "RcppMeCab", "Rcplex", "ravetools", "Rbeast", "Rblpapi", "RcppEnsmallen", "qtkit", "priorCON", "prior3D", "PerFit", "outlierensembles", "nomnoml", "mxfda", "MultBiplotR", "mstDIF", "mdsr", "makepipe", "lordif", "KSgeneral", "kequate", "jstager", "jrt", "irtreliability", "irtQ", "irtpwr", "irtawsi", "GRShiny", "gpuR", "googletraffic", "giacR", "gamstransfer", "flps", "flow", "filters", "faoutlier", "equateIRT", "EnrichIntersect", "EFA.dimensions", "DFIT", "D3mirt", "ctgdist", "CoTiMA", "ConvertPar", "clrng", "bscui", "BifactorIndicesCalculator", "autoFC", "airt")); library(bincraftR); future::plan("${STRATEGY}", workers = ${NCPUS}, rscript_startup = quote(options(crayon.enabled = TRUE))); options(progressr.enable = TRUE); progressr::handlers("cli"); progressr::handlers(global = TRUE); pkgs = foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE, platform = "${PLATFORM}"))'
# biplotbootGUI: somehow ubuntu still hangs even when using xvfb-run
- R -q -e 'options(crayon.enabled = TRUE, Ncpus = ${NCPUS}, future.globals.onReference = NULL); pkgs = tools::CRAN_package_db()[[1]]; pkgs = setdiff(pkgs[${BLOCK}], c("biplotbootGUI", "Rsymphony", "PortfolioAnalytics", "ROI.plugin.symphony", "adea", "RInno", "skedastic", "RPushbullet", "SimNPH", "SimDesign","simCAT", "SIAmodules", "shinytest2", "shinyIRT", "ShinyItemAnalysis", "shiny.benchmark", "scDIFtest", "RSP", "ROracle", "ROI.plugin.qpoases", "ROI.plugin.cplex", "RmecabKo", "rmarchingcubes", "RcppMeCab", "Rcplex", "ravetools", "Rbeast", "Rblpapi", "RcppEnsmallen", "qtkit", "priorCON", "prior3D", "PerFit", "outlierensembles", "nomnoml", "mxfda", "MultBiplotR", "mstDIF", "mdsr", "makepipe", "lordif", "KSgeneral", "kequate", "jstager", "jrt", "irtreliability", "irtQ", "irtpwr", "irtawsi", "GRShiny", "gpuR", "googletraffic", "giacR", "gamstransfer", "flps", "flow", "filters", "faoutlier", "equateIRT", "EnrichIntersect", "EFA.dimensions", "DFIT", "D3mirt", "ctgdist", "CoTiMA", "ConvertPar", "clrng", "bscui", "BifactorIndicesCalculator", "autoFC", "airt")); library(bincraftR); future::plan("${STRATEGY}", workers = ${NCPUS}, rscript_startup = quote(options(crayon.enabled = TRUE))); options(progressr.enable = TRUE); progressr::handlers("cli"); progressr::handlers(global = TRUE); pkgs = foo = lapply(pkgs, function(x) build_binary_package(x, build_for_minor=FALSE, debug = FALSE, force = TRUE, platform = "${PLATFORM}"))'
### Manual pkg builds
# webshot2, tabledown, TestAnaAPP, trekcolors, Spectran, SimNPH, RPushbullet, SimDesign, simCAT, SIAmodules, shinytest2, ShinyItemAnalysis, shinyIRT, shiny.benchmark, scDIFtest, RSP, qtkit, PROsetta, prettifyAddins, PerFit, outlierensembles, nomnoml, mxfda, MultBiplotR, mstDIF, mdsr, makepipe, lordif, kequate, jstager, jrt, irtreliability, irtQ, irtpwr, irtGUI, irtawsi, GRShiny, GPCMlasso, googletraffic, giacR, flps, flow, faoutlier, equateIRT, EnrichIntersect, EFA.dimensions, DFIT, D3mirt, ctgdist, CoTiMA, ConvertPar, bscui, BifactorIndicesCalculator, autoFC, airt: wait for https://github.com/rstudio/r-system-requirements/pull/178
# RInno: Windows-only
@ -138,10 +139,10 @@ steps:
resources:
requests:
memory: ${MEMORY}
# cpu: 12000m
cpu: 12000m
limits:
memory: ${MEMORY}
# cpu: 16000m
cpu: 16000m
### PROD-sequential
# resources:
# requests: