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This commit is contained in:
Patrick Schratz 2024-09-06 11:06:01 +02:00
commit 156d05a636
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 4 additions and 4 deletions
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8
.woodpecker/process_cran_updates.yaml
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@ -28,7 +28,7 @@ matrix:
steps: steps:
- name: 'Processing Updates: (${PLATFORM})' - name: 'Processing Updates: (${PLATFORM})'
secrets: [red_hat_dev_pw, aws_access_key_id, aws_secret_access_key, pgpass, git_ro_token, GITHUB_PAT] secrets: [red_hat_dev_pw, aws_access_key_id, aws_secret_access_key, pgpass, git_ro_token, GITHUB_PAT]
image: docker.io/devxygmbh/arm64-binaries-r-${PLATFORM} image: docker.io/devxygmbh/${ARCH}-binaries-r-${PLATFORM}
pull: true pull: true
# to ensure the PACKAGES upload step is being executed # to ensure the PACKAGES upload step is being executed
failure: ignore failure: ignore
@ -39,13 +39,13 @@ steps:
R_LIBS_USER: /mnt/cache/R-pkgs R_LIBS_USER: /mnt/cache/R-pkgs
CCACHE_DIR: /mnt/cache/ccache CCACHE_DIR: /mnt/cache/ccache
volumes: volumes:
- arm64-binaries-r-dep-cache-${PLATFORM}:/mnt/cache - ${ARCH}-binaries-r-dep-cache-${PLATFORM}:/mnt/cache
commands: commands:
# download latest package version (avoid having to rebuild image every time) # download latest package version (avoid having to rebuild image every time)
- git clone https://pat-s:$$git_ro_token@git.devxy.io/devxy/r-pkg-binaries.git . - git clone https://pat-s:$$git_ro_token@git.devxy.io/devxy/r-pkg-binaries.git .
- rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /opt/R/*/lib/R/library/RPostgres /mnt/cache/R-pkgs/00LOCK-RPostgres - rm -rf /mnt/cache/R-pkgs/00LOCK-r-pkg-binaries /mnt/cache/R-pkgs/00LOCK-bincraftR /opt/R/*/lib/R/library/RPostgres /mnt/cache/R-pkgs/00LOCK-RPostgres
- rm -rf /mnt/cache/R-pkgs/RPostgres /mnt/cache/pkgcache/R/pkgcache - rm -rf /mnt/cache/R-pkgs/RPostgres /mnt/cache/pkgcache/R/pkgcache
- R -q -e 'options(Ncpus = 4, repos = structure(c(devxy = "https://cran.devxy.io/${ARCH}/${PKGS_ID}/latest", CRAN = "https://cloud.r-project.org"))); devtools::install(quiet = TRUE); packageVersion("bincraftR")' - R CMD INSTALL .
- mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" >> /root/.R/Makevars' - mkdir -p /root/.R && /bin/bash -c 'echo -e "CXX_STD = CXX14\nCC=ccache gcc\nCPP=ccache gcc\nCXX=ccache g++\nCXX11=ccache g++\nCXX14=ccache g++\nCXX17=ccache g++\nF77=ccache /usr/bin/gfortran\nFC=ccache /usr/bin/gfortran" >> /root/.R/Makevars'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages - mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
# set additional repos: important as otherwise some packages cannot be resolved (e.g. INLA). Also: setting our own binary repos so we can make use of them for dep installation at some point # set additional repos: important as otherwise some packages cannot be resolved (e.g. INLA). Also: setting our own binary repos so we can make use of them for dep installation at some point
@ -70,7 +70,7 @@ steps:
# memory: 4Gi # memory: 4Gi
# cpu: 2000m # cpu: 2000m
nodeSelector: nodeSelector:
kubernetes.io/arch: 'arm64' kubernetes.io/arch: '${ARCH}'
tolerations: tolerations:
- key: 'CI' - key: 'CI'
operator: 'Equal' operator: 'Equal'