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Code Issues 11 Pull requests Releases Activity

image regressions

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This commit is contained in:
Patrick Schratz 2024-11-26 23:08:26 +01:00
commit 11db4556b3
Signed by: pat-s
GPG key ID: 3C6318841EF78925
1 changed files with 29 additions and 11 deletions
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.woodpecker/build-redhat-9-amd64.yaml
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@ -38,7 +38,7 @@ steps:
- R -q -e 'packageVersion("bincraftR")'
- mkdir -p /mnt/cache/pkgcache /mnt/cache/R-pkgs /mnt/cache/ccache /mnt/cache/packages
# Windows-only: 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd'
- xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL, repos = structure(c(devxy = 'https://cran.devxy.io/amd64/rhel9/latest', CRAN = 'https://cloud.r-project.org'))); library(dplyr); library(bincraftR); cran_pkgs = tools::CRAN_package_db()[['Package']]; '%nin%' <- Negate('%in%'); foo = query_metadata_table() |> filter(platform == 'redhat-9', arch == 'amd64') |> distinct(name) |> pull(name); pkgs <- dput(cran_pkgs[cran_pkgs %nin% foo][0:300]); options(progressr.enable = TRUE); pkgs = c('later', 'MediaNews', 'RInno', 'sbmSDP', 'sbo', 'sboost', 'sbrl', 'SC.MEB', 'Scalelink', 'ScaleSpikeSlab', 'scalpel', 'scar', 'ScatterDensity', 'scattermore', 'SCBiclust', 'scCAN', 'SCCI', 'scclust', 'sccore', 'SCdeconR', 'scDHA', 'scellpam', 'SCEPtER', 'SCEPtERbinary', 'scGate', 'scGOclust', 'sched', 'scINSIGHT', 'SCIntRuler', 'scISR', 'scistreer', 'scITD', 'scMappR', 'scModels', 'scOntoMatch', 'scoper', 'scorematchingad', 'scorepeak', 'scoringRules', 'SCORNET', 'scout', 'scplot', 'scquantum', 'SCRIP', 'scrm', 'ScRNAIMM', 'scRNAtools', 'scrypt', 'scs', 'scTenifoldKnk', 'SCtools', 'SDAR', 'sdcMicro', 'sdcTable', 'sde', 'sdetorus', 'sdmTMB', 'SDMtune', 'sdpdth', 'sdprisk', 'sdpt3r', 'sdrt', 'sdwd', 'SEA', 'SearchTrees', 'seas', 'SECP', 'secretbase', 'secsse', 'sectorgap', 'secure', 'seededlda', 'SeedMatchR', 'seeker', 'seer', 'segclust2d', 'segmag', 'segmenTier', 'segmentr', 'segMGarch', 'seismicRoll', 'SEL', 'selectiveInference', 'selectspm', 'SELF', 'SemiCompRisks', 'semidist', 'semnar', 'semver', 'SenSpe', 'sentencepiece', 'sentiment.ai', 'sentometrics', 'sentopics', 'sephora', 'seq2R', 'SeqDetect', 'seqgendiff', 'seqHMM', 'seqinr', 'SeqKat', 'seqminer', 'SeqNet', 'seqtrie', 'SequenceSpikeSlab', 'SequentialDesign', 'sequoia', 'seriation', 'serocalculator', 'serrsBayes', 'Seurat', 'SeuratObject', 'sfcr', 'sfcurve', 'sfdct', 'sfheaders', 'sfhotspot', 'SFS', 'SFSI', 'sgd', 'SGDinference', 'sgeostat', 'SGL', 'sglasso', 'sgmodel', 'sgolay', 'SGPR', 'sgsR', 'shapr', 'shapviz', 'sharpeRratio', 'sharpPen', 'SheetReader', 'ShellChron', 'SherlockHolmes', 'shide', 'ShiftConvolvePoibin', 'shiftR', 'shiny.blueprint', 'shiny.fluent', 'shiny.reglog', 'shinyCohortBuilder', 'shinydbauth', 'shinyExprPortal', 'shinyKGode', 'ShinyLink', 'shinymanager', 'shinyMolBio', 'shinypivottabler', 'shinyQueryBuilder', 'shinyrecipes', 'shinyTime', 'skedastic', 'spectrino', 'surveyvoi', 'taskscheduleR', 'theft', 'theftdlc', 'trtswitch', 'ursa'); pkgs = setdiff(pkgs, c('RInno', 'MediaNews', 'later', 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd')); progressr::handlers('cli'); progressr::handlers(global = TRUE); foo = lapply(pkgs, function(x) bincraftR::build_binary_package(x, debug = FALSE, force = TRUE, platform = 'redhat-9'))"
- xvfb-run R -q -e "options(crayon.enabled = TRUE, Ncpus = $NCPUS, future.globals.onReference = NULL, repos = structure(c(CRAN = 'https://cran.devxy.io/$ARCH/rhel9/latest'))); pkgs = c('paws.common', 'paws.storage', 'rlang', 'bit', 'bit64', 'RSQLite', 'vctrs'); pkgs = setdiff(pkgs, c('RInno', 'MediaNews', 'RInno', 'KeyboardSimulator', 'R2PPT', 'RWinEdt', 'blatr', 'excel.link', 'spectrino', 'taskscheduleR', 'MDSGUI', 'BiplotGUI', 'R2wd')); progressr::handlers('cli'); progressr::handlers(global = TRUE); foo = lapply(pkgs, function(x) bincraftR::build_binary_package(x, debug = FALSE, force = TRUE, platform = 'redhat-9'))"
### Manual pkg builds
# webshot2, tabledown, TestAnaAPP, trekcolors, Spectran, SimNPH, RPushbullet, SimDesign, simCAT, SIAmodules, shinytest2, ShinyItemAnalysis, shinyIRT, shiny.benchmark, scDIFtest, RSP, qtkit, PROsetta, prettifyAddins, PerFit, outlierensembles, nomnoml, mxfda, MultBiplotR, mstDIF, mdsr, makepipe, lordif, kequate, jstager, jrt, irtreliability, irtQ, irtpwr, irtGUI, irtawsi, GRShiny, GPCMlasso, googletraffic, giacR, flps, flow, faoutlier, equateIRT, EnrichIntersect, EFA.dimensions, DFIT, D3mirt, ctgdist, CoTiMA, ConvertPar, bscui, BifactorIndicesCalculator, autoFC, airt: wait for https://github.com/rstudio/r-system-requirements/pull/178
# RInno: Windows-only